Editing GWAS: experimental approaches to dissect and exploit disease-associated genetic variation
Shuquan Rao1, Yao Yao2,3, Daniel E Bauer4
1Division of Hematology/Oncology, Boston Children's Hospital; Department of Pediatric Oncology, Dana-Farber Cancer Institute; Harvard Stem Cell Institute; Broad Institute; Department of Pediatrics, Harvard Medical School, Boston, MA, USA. shuquan.rao@gmail.com.
Genome Medicine
|March 11, 2021
Summary
Genome-wide association studies (GWAS) identify genetic variants linked to diseases. This review explores functional studies and genome editing to understand these variants and develop new therapies.
Area of Science:
- Genetics and Genomics
- Molecular Biology
- Translational Medicine
Background:
- Genome-wide association studies (GWAS) have identified numerous genetic variants associated with human diseases and traits.
- A major challenge is elucidating the functional mechanisms of these variants, particularly noncoding ones, in disease etiology.
- Translating GWAS findings into clinical applications for disease prevention and treatment remains a significant hurdle.
Purpose of the Study:
- To review emerging experimental approaches for functional studies of causal genetic variants identified by GWAS.
- To discuss translational advances and therapeutic opportunities arising from GWAS findings.
- To highlight the role of genome editing technologies in understanding GWAS locus mechanisms.
Main Methods:
- Review of current literature on functional genomics and GWAS.
- Discussion of experimental techniques, including genome editing, for variant interrogation.
- Analysis of challenges and considerations in experimental design and interpretation.
Main Results:
- Emerging experimental approaches, including genome editing, are crucial for functional studies of GWAS variants.
- Proof-of-principle examples demonstrate the utility of genome editing in modifying genomic sequences for functional validation.
- Understanding causal variants opens avenues for novel therapeutic strategies.
Conclusions:
- Functional genetics is advancing our understanding of GWAS findings.
- Therapeutic genome editing based on GWAS discoveries is becoming increasingly feasible.
- Bridging the gap between genetic discoveries and clinical applications is essential for disease prevention and treatment.
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