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Updated: Nov 14, 2025

Hybrid De Novo Genome Assembly for the Generation of Complete Genomes of Urinary Bacteria using Short- and Long-read Sequencing Technologies
Published on: August 20, 2021
Genome Sequences for Two Acinetobacter baumannii Strains Obtained Using the Unicycler Hybrid Assembly Pipeline
John M Farrow1, Everett C Pesci2, Daniel J Slade3
1Department of Microbiology and Immunology, The Brody School of Medicine at East Carolina University, Greenville, North Carolina, USA dslade@vt.edu farrowj@ecu.edu.
Abstract:
Here, we report a complete genome sequence for Acinetobacter baumannii strain ATCC 17961, with plasmid sequences, and a high-quality (>98% complete) build for A. baumannii strain AB09-003. These genome sequences were generated by combining short-read Illumina and long-read Oxford Nanopore MinION sequencing data using the Unicycler hybrid assembly pipeline.
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