Related Experiment Video
Updated: Nov 14, 2025

Development of a Hepatitis B Virus Reporter System to Monitor the Early Stages of the Replication Cycle
Published on: February 1, 2017
Hepatitis B virus cccDNA is formed through distinct repair processes of each strand
1Department of Molecular Biology, Lewis Thomas Laboratory, Princeton University, Washington Road, Princeton, NJ, USA.
Insights
Hepatitis B virus (HBV) chronic infection stems from its covalently closed circular DNA (cccDNA). This study reveals distinct human repair factors are needed for HBV relaxed circular DNA (rcDNA) minus and plus-strand repair, clarifying cccDNA formation.
Area of Science:
- Virology
- Molecular Biology
- Biochemistry
Background:
- Hepatitis B virus (HBV) infection affects over a third of the global population, causing nearly a million deaths annually.
- The persistence of HBV covalently closed circular DNA (cccDNA) is the primary driver of chronic HBV infection.
- The precise molecular mechanisms underlying cccDNA formation from relaxed circular DNA (rcDNA) are not fully understood.
Purpose of the Study:
- To elucidate the molecular mechanisms of HBV cccDNA formation from rcDNA.
- To identify the specific human repair factors involved in the distinct repair pathways of HBV rcDNA minus and plus strands.
Main Methods:
- Utilized biochemical repair systems to analyze the repair of HBV rcDNA minus and plus-strand lesions.
- Investigated the requirement for specific human DNA repair factors, including proliferating cell nuclear antigen (PCNA), replication factor C (RFC) complex, DNA polymerase delta (POLδ), flap endonuclease 1 (FEN-1), and DNA ligase 1 (LIG1).
Main Results:
- Demonstrated that the repair of the HBV rcDNA plus strand requires PCNA, RFC, POLδ, FEN-1, and LIG1, resembling DNA lagging strand synthesis.
- Showed that only FEN-1 and LIG1 are necessary for the repair of the HBV rcDNA minus strand.
- Provided a detailed mechanistic understanding of rcDNA repair into cccDNA within biochemical systems.
Conclusions:
- The distinct requirements for human repair factors in minus and plus-strand DNA repair highlight a complex process in HBV cccDNA formation.
- These findings offer crucial insights into the molecular basis of HBV persistence and potential therapeutic targets for chronic hepatitis B.
Abstract:
Hepatitis B virus (HBV) is a highly contagious pathogen that afflicts over a third of the world's population, resulting in close to a million deaths annually. The formation and persistence of the HBV covalently closed circular DNA (cccDNA) is the root cause of HBV chronicity. However, the detailed molecular mechanism of cccDNA formation from relaxed circular DNA (rcDNA) remains opaque. Here we show that the minus and plus-strand lesions of HBV rcDNA require different sets of human repair factors in biochemical repair systems. We demonstrate that the plus-strand repair resembles DNA lagging strand synthesis, and requires proliferating cell nuclear antigen (PCNA), the replication factor C (RFC) complex, DNA polymerase delta (POLδ), flap endonuclease 1 (FEN-1), and DNA ligase 1 (LIG1). Only FEN-1 and LIG1 are required for the repair of the minus strand. Our findings provide a detailed mechanistic view of how HBV rcDNA is repaired to form cccDNA in biochemical repair systems.
Related Concept Videos
Homologous Recombination
Restarting Stalled Replication Forks
Long-patch Base Excision Repair
Fixing Double-strand Breaks
Fixing Double-strand Breaks
Translesion DNA Polymerases
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...

