Multiplex and on-site PCR detection of swine diseases based on the microfluidic chip system

Yan Jiang1, Shan Jiang2, Yue Wu3

  • 1Animal, Plant and Food Inspection Center, Nanjing Customs, Nanjing, 210019, China. 544235973@qq.com.

Abstract

Insights

This study developed a microfluidic chip for rapid, high-throughput detection of swine pathogenic microorganisms at customs ports. The system provides accurate on-site results within an hour, reducing sample degradation and infection risks.

Area of Science:

  • Veterinary diagnostics
  • Microfluidics
  • Molecular biology

Background:

  • Current inspection processes involve lengthy sample transport, risking degradation and pathogen spread.
  • There is a critical need for rapid, high-throughput detection of swine pathogens at customs ports.
  • Existing methods do not meet the demand for swift, on-site analysis.

Purpose of the Study:

  • To develop a microfluidic chip for rapid, high-throughput, and accurate detection of swine pathogenic microorganisms.
  • To decrease the risk of infection spread during sample transportation.
  • To enable on-site, real-time quantitative PCR detection.

Main Methods:

  • Development and validation of a microfluidic chip integrated with a portable PCR system.
  • Utilizing real-time quantitative PCR for pathogen detection.
  • Testing with known swine viruses and clinical samples.

Main Results:

  • The microfluidic chip successfully detected nucleic acids of four swine viruses with high specificity.
  • On-site, real-time quantitative PCR detection was achieved.
  • Results for eight clinical samples were obtained in under one hour, with a limit of detection as low as 1 copy/μL.

Conclusions:

  • The developed microfluidic PCR system meets the requirements for rapid customs port sample detection.
  • The chip mitigates risks associated with sample transport and significantly shortens inspection cycles.
  • Parallel inspections on a single chip enhance overall inspection efficiency.

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