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Investigation of the Transcriptional Role of a RUNX1 Intronic Silencer by CRISPR/Cas9 Ribonucleoprotein in Acute Myeloid Leukemia Cells
Published on: September 1, 2019
CircSPI1 acts as an oncogene in acute myeloid leukemia through antagonizing SPI1 and interacting with microRNAs
Xiaoling Wang1, Peng Jin1, Yi Zhang1
1Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Abstract:
PU.1 (encoded by SPI1) is essential for myeloid development, and inhibition of its expression and activity can lead to acute myeloid leukemia (AML). The precise regulation of PU.1 expression is crucial for the development of AML, and the discovery of circular RNAs (circRNAs) can add a new layer of information on regulation. Here, we found that circSPI1, the circular RNA derived from the SPI1 gene, is highly expressed in AML but not in normal counterparts. Unlike SPI1, a tumor suppressor and being lowly expressed in AML, we demonstrate that circSPI1 acts as an oncogene, evidenced by the observation that circSPI1 knockdown induces myeloid differentiation and apoptosis of AML cells. We provide mechanistic evidence for multiple regulatory roles of circSPI1 in AML progression. On one hand, circSPI1 contributes to myeloid differentiation of AML cells by interacting with the translation initiation factor eIF4AIII to antagonize PU.1 expression at the translation level. On the other hand, circSPI1 contributes to proliferation and apoptosis by interacting with miR-1307-3p, miR-382-5p, and miR-767-5p; this role is uncoupled with SPI1. Finally, we illustrate the clinical significance of circSPI1 by showing that circSPI1-regulated genes are associated with the clinical outcome of AML patients. Our data provide new insight into the complex SPI1 gene regulation now involving circSPI1.
Insights
Circular RNA circSPI1 is highly expressed in acute myeloid leukemia (AML) and acts as an oncogene. Knockdown of circSPI1 induces AML cell differentiation and apoptosis, revealing novel regulatory roles in AML.
Area of Science:
- Hematology
- Molecular Biology
- Oncology
Background:
- PU.1 (SPI1) is critical for myeloid development; its dysregulation is implicated in acute myeloid leukemia (AML).
- Circular RNAs (circRNAs) represent a novel regulatory layer in gene expression, particularly relevant in complex diseases like AML.
Purpose of the Study:
- To investigate the role of circSPI1, a circRNA derived from the SPI1 gene, in the pathogenesis of AML.
- To elucidate the molecular mechanisms by which circSPI1 influences AML cell behavior and clinical outcomes.
Main Methods:
- Expression analysis of circSPI1 in AML versus normal samples.
- Functional studies involving circSPI1 knockdown in AML cell lines.
- Mechanistic investigations of circSPI1 interactions with proteins (e.g., eIF4AIII) and microRNAs (e.g., miR-1307-3p, miR-382-5p, miR-767-5p).
- Correlation analysis of circSPI1-regulated genes with clinical data from AML patients.
Main Results:
- circSPI1 is significantly upregulated in AML compared to normal counterparts.
- circSPI1 knockdown promotes myeloid differentiation and apoptosis in AML cells, indicating an oncogenic role.
- circSPI1 antagonizes PU.1 translation via eIF4AIII and regulates proliferation/apoptosis through interactions with specific microRNAs, independent of SPI1.
- circSPI1-associated gene expression signatures correlate with patient clinical outcomes.
Conclusions:
- circSPI1 functions as an oncogene in AML, promoting disease progression.
- circSPI1 exerts its oncogenic functions through distinct mechanisms involving translational repression of PU.1 and microRNA sponging.
- circSPI1 represents a potential diagnostic biomarker and therapeutic target for AML.
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