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Updated: Nov 11, 2025

Analyzing Protein Dynamics Using Hydrogen Exchange Mass Spectrometry
Published on: November 29, 2013
Hydrogen Bond Surrogate-Constrained Dynamic Antiparallel β-Sheets
Sravanthi S Reddy1, Sunit Pal1, Sudip Ghosh1
1Department of Organic Chemistry, Indian Institution of Science, 560 012, Bangalore, Karnataka, India.
Abstract:
Antiparallel β-sheets are important secondary structures within proteins that equilibrate with random-coil states; however, little is known about the exact dynamics of this process. Here, the first dynamic β-sheet models that mimic this equilibrium have been designed by using an H-bond surrogate that introduces constraint and torque into a tertiary amide bond. 2D NMR data sufficiently reveal the structure, kinetics, and thermodynamics of the folding process, thereby leading the way to similar analysis in isolated biologically relevant β-sheets.
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