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Updated: Nov 11, 2025

Next-generation Sequencing of 16S Ribosomal RNA Gene Amplicons
Published on: August 29, 2014
Origin of the 16S Ribosomal Molecule from Ancestor tRNAs
Savio Torres de Farias1,2, Thais Gaudêncio Rêgo3, Marco V José4
1Laboratório de Genética Evolutiva Paulo Leminsk, Departamento de Biologia Molecular, Universidade Federal da Paraíba, João Pessoa, 58051-900, Brazil. stfarias@yahoo.com.br.
Ancestral transfer RNAs (tRNAs) may have formed the 16S ribosomal RNA. Proto-tRNAs and the 16S ribosomal RNA's 3' upper domain show high sequence and structural identity, suggesting an evolutionary link.
Area of Science:
- Evolutionary biology
- Molecular biology
- Origin of life
Background:
- The origin of ribosomal RNA (rRNA) and ribosomal subunits is a key question in understanding the early evolution of life.
- Transfer RNA (tRNA) molecules are fundamental to protein synthesis and have ancient origins.
Purpose of the Study:
- To test the hypothesis that concatemers of ancestral tRNAs gave rise to the 16S ribosomal RNA.
- To explore the potential role of proto-tRNAs in the formation of the small ribosomal subunit and the early ribosome.
Main Methods:
- Construction of an ancestral proto-tRNA sequence.
- Comparative analysis of sequence and structural identity between the reconstructed proto-tRNA and the 3' upper domain of 16S ribosomal RNA.
Main Results:
- The reconstructed ancestral proto-tRNA sequence exhibited significant sequence identity (51.69%) and structural identity (0.941) with the 3' upper domain of 16S ribosomal RNA.
- A hypothesis is proposed where proto-tRNA fusion led to the emergence of the small ribosomal subunit, acting as an RNA-binding platform.
Conclusions:
- Ancestral tRNAs are plausible precursors to 16S ribosomal RNA.
- The early ribosome may have formed through proto-tRNA fusion and subsequent subunit association mediated by tRNA interactions during primordial genetic code development.
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