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Circular RNA Microarray Analyses in Hepatic Ischemia-Reperfusion Injury With Ischemic Preconditioning Prevention
Xinyao Tian1,2, Yan Hu3, Yuanxing Liu1
1Division of Hepatobiliary and Pancreatic Surgery, Department of Surgery, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China.
Frontiers in Medicine
|March 25, 2021
Summary
Ischemic preconditioning (IPC) protects the liver from ischemia-reperfusion injury (IRI) by altering circular RNA (circRNA) and mRNA expression. This study identifies key circRNAs and pathways involved in IPC
Area of Science:
- Molecular Biology
- Hepatology
- Bioinformatics
Background:
- Hepatic ischemia-reperfusion injury (IRI) poses a significant clinical challenge.
- Ischemic preconditioning (IPC) is a known protective strategy against hepatic IRI.
- The molecular mechanisms, particularly involving circular RNAs (circRNAs), underlying IPC's protective effects require further elucidation.
Purpose of the Study:
- To systematically detect and analyze circRNA and mRNA expression profiles in hepatic IRI.
- To investigate the impact of IPC on these expression profiles.
- To identify potential circRNA-miRNA-mRNA axes involved in IPC-mediated protection against hepatic IRI.
Main Methods:
- Microarray analysis was employed to profile circRNA and mRNA expression in liver tissues.
- Samples included sham-operated, hepatic IRI, and IPC groups (n=3 per group).
- Bioinformatic analysis was used to identify differentially expressed molecules and construct regulatory axes.
Main Results:
- Hepatic IRI significantly altered the expression of numerous circRNAs and mRNAs compared to sham controls.
- IPC intervention modulated the expression of specific circRNAs and mRNAs in IRI livers.
- circRNA_017753 was identified as a potential key player in IPC signaling, possibly targeting Jade1.
- Three circRNA-miRNA-mRNA axes were proposed as crucial for IPC's protective mechanisms.
Conclusions:
- This study provides the first systematic transcriptomic profile of circRNAs and mRNAs in response to hepatic IRI and IPC.
- The findings offer novel insights into the molecular mechanisms of IPC protection against hepatic IRI.
- Identified circRNAs and pathways serve as potential therapeutic targets for mitigating liver injury.
Keywords:
circular RNAhigh-throughput sequencingischemia-reperfusion injuryischemic preconditioningmicroarray analyses
