Multiple machine learning, molecular docking, and ADMET screening approach for identification of selective inhibitors

Baddipadige Raju1, Himanshu Verma1, Gera Narendra1

  • 1Molecular Modeling Lab (MML), Department of Pharmaceutical Sciences and Drug Research, Punjabi University, Patiala, Punjab, India.

Insights

Researchers identified novel selective inhibitors for Cytochrome P4501B1 (CYP1B1), a protein overexpressed in tumors that causes drug resistance. These identified compounds may overcome chemotherapy resistance and are potentially safe for further studies.

Area of Science:

  • Biochemistry
  • Pharmacology
  • Computational Chemistry

Background:

  • Cytochrome P4501B1 (CYP1B1) is overexpressed in tumors and inactivates anti-cancer drugs, leading to chemotherapy resistance.
  • Identifying selective CYP1B1 inhibitors is crucial for overcoming this drug resistance.

Purpose of the Study:

  • To identify selective inhibitors of Cytochrome P4501B1 (CYP1B1) using integrated in-silico approaches.
  • To find novel compounds that can overcome drug resistance in cancer treatment.

Main Methods:

  • Development of machine learning models for CYP1A1 and CYP1B1 isoforms.
  • Screening of small molecule and natural compound databases.
  • Molecular docking, ADMET analysis, and molecular dynamics simulations for selectivity and stability assessment.

Main Results:

  • Two novel compounds, CYP-D9 and CYP-14, were identified as highly selective CYP1B1 inhibitors.
  • These compounds demonstrated stability and key interactions within the CYP1B1 active site.
  • The identified inhibitors show potential for overcoming chemotherapy resistance and are deemed safe for further preclinical studies.

Conclusions:

  • Novel selective CYP1B1 inhibitors (CYP-D9 and CYP-14) were identified using in-silico methods.
  • These compounds offer a promising strategy to address drug resistance in cancer therapy.
  • The identified inhibitors are suitable for subsequent cell-based and animal model investigations.

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