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From Reductionism to Reintegration: Solving society's most pressing problems requires building bridges between data
Anne E Thessen1, Paul Bogdan2, David J Patterson3
1Department of Environmental and Molecular Toxicology, Oregon State University, Corvallis, Oregon, United States of America.
Integrating biological data is crucial for tackling global challenges like climate change. A "Data as a Service" architecture can overcome barriers, promoting data reuse for scientific discovery and interdisciplinary collaboration.
Area of Science:
- Biology
- Ecology
- Environmental Science
- Data Science
Background:
- Reductionist approaches in biology have yielded progress but created data silos.
- Proliferation of subdisciplines hinders multidisciplinary and interdisciplinary research.
- Addressing global challenges requires integrated biological data.
Purpose of the Study:
- To identify challenges in biological data integration.
- To propose a
- Data as a Service
- -oriented architecture for data reuse.
- To foster a reintegrated biology for global issue resolution.
Main Methods:
- Analysis of challenges in biological data integration.
- Conceptualization of a service-oriented architecture for data.
- Identification of needs for standards, tools, and career development.
Main Results:
- Major challenges to biological data integration were identified.
- A vision for a
- Data as a Service
- architecture was presented.
- Key components including standards, tools, and career strategies were outlined.
Conclusions:
- Data integration is essential for a "reintegrated biology" capable of addressing global challenges.
- A
- Data as a Service
- -oriented architecture can facilitate data reuse and discovery.
- Overcoming data integration barriers requires a holistic approach encompassing technical and cultural aspects.
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