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Updated: Nov 11, 2025

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Monitoring Spatial Segregation in Surface Colonizing Microbial Populations
Published on: October 29, 2016
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The dynamics of cable bacteria colonization in surface sediments: a 2D view
Hang Yin1, Robert C Aller2, Qingzhi Zhu3
1School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794-5000, USA.
Scientific Reports
|March 31, 2021
Summary
Cable bacteria colonize sediment, creating distinct pH and sulfide patterns. Their spread, influenced by reductant availability, reveals insights into elemental cycling in diverse environments.
Area of Science:
- Geomicrobiology
- Environmental Science
- Biogeochemistry
Background:
- Cable bacteria are electrogenic microorganisms found in sediments.
- Their electron transport capabilities influence diagenesis and elemental cycling.
- Understanding their colonization dynamics is crucial for comprehending sediment processes.
Purpose of the Study:
- To visualize and quantify the spatial and temporal colonization of sediment by cable bacteria in 2D.
- To investigate the development of pH and H2S patterns associated with cable bacteria activity.
- To correlate cell abundance dynamics with observed biogeochemical changes.
Main Methods:
- Utilized planar optical sensors for pH and H2S to map sediment surface.
- Monitored colonization patterns over time in laboratory sediment experiments.
- Analyzed changes in cable bacteria cell abundance in relation to electrogenic activity.
Main Results:
- Sediment surface pH maximum zones developed within 5 days, spreading laterally at 0.3–1.2 cm/day.
- Electrogenic anodic zones (low pH) and H2S heterogeneities expanded with colonization.
- Subsurface cable bacteria abundance increased as electrogenic activity spread, consistent with filament growth.
Conclusions:
- Cable bacteria colonization creates distinct biogeochemical fingerprints (pH-H2S patterns).
- Growth and aggregation are linked to favorable microenvironments and reductant availability (e.g., sulfide).
- Sediment properties and reductant accessibility critically control cable bacteria development and activity.

