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Updated: Nov 10, 2025

Engineering Antiviral Agents via Surface Plasmon Resonance
Published on: June 14, 2022
Serine metabolism antagonizes antiviral innate immunity by preventing ATP6V0d2-mediated YAP lysosomal degradation
Long Shen1, Penghui Hu1, Yanan Zhang1
1Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Immunology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, China.
Abstract:
Serine metabolism promotes tumor oncogenesis and regulates immune cell functions, but whether it also contributes to antiviral innate immunity is unknown. Here, we demonstrate that virus-infected macrophages display decreased expression of serine synthesis pathway (SSP) enzymes. Suppressing the SSP key enzyme phosphoglycerate dehydrogenase (PHGDH) by genetic approaches or by treatment with the pharmaceutical inhibitor CBR-5884 and by exogenous serine restriction enhanced IFN-β-mediated antiviral innate immunity in vitro and in vivo. Mechanistic experiments showed that virus infection or serine metabolism deficiency increased the expression of the V-ATPase subunit ATP6V0d2 by inhibiting S-adenosyl methionine-dependent H3K27me3 occupancy at the promoter. ATP6V0d2 promoted YAP lysosomal degradation to relieve YAP-mediated blockade of the TBK1-IRF3 axis and, thus, enhance IFN-β production. These findings implicate critical functions of PHGDH and the key immunometabolite serine in blunting antiviral innate immunity and also suggest manipulation of serine metabolism as a therapeutic strategy against virus infection.
Insights
Serine metabolism, specifically phosphoglycerate dehydrogenase (PHGDH), dampens antiviral defenses. Inhibiting PHGDH boosts interferon-beta (IFN-β) production, enhancing innate immunity against viral infections.
Area of Science:
- Immunometabolism
- Virology
- Cellular Biology
Background:
- Serine metabolism influences oncogenesis and immune cell function.
- Its role in antiviral innate immunity remains unexplored.
Purpose of the Study:
- To investigate the contribution of serine metabolism to antiviral innate immunity.
- To elucidate the mechanisms by which serine metabolism impacts interferon-beta (IFN-β) production.
Main Methods:
- Studied serine synthesis pathway (SSP) enzyme expression in virus-infected macrophages.
- Utilized genetic suppression and pharmacological inhibition of phosphoglycerate dehydrogenase (PHGDH).
- Investigated the impact of serine metabolism on ATP6V0d2, YAP, and the TBK1-IRF3 signaling pathway.
Main Results:
- Virus infection decreased SSP enzyme expression in macrophages.
- PHGDH suppression or serine restriction enhanced IFN-β-mediated antiviral immunity in vitro and in vivo.
- Serine metabolism deficiency increased ATP6V0d2 expression by altering H3K27me3.
- ATP6V0d2 promoted YAP degradation, relieving the blockade on the TBK1-IRF3 axis and boosting IFN-β production.
Conclusions:
- Phosphoglycerate dehydrogenase (PHGDH) and serine metabolism play a critical role in suppressing antiviral innate immunity.
- Targeting serine metabolism presents a potential therapeutic strategy for viral infections.
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