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Updated: Nov 10, 2025

Oncogenic Gene Fusion Detection Using Anchored Multiplex Polymerase Chain Reaction Followed by Next Generation Sequencing
Published on: July 5, 2019
NTRK Fusions in Sarcomas: Diagnostic Challenges and Clinical Aspects
Vasiliki Siozopoulou1,2, Evelien Smits2,3, Koen De Winne1
1Department of Pathology, Antwerp University Hospital, 2650 Edegem, Belgium.
Abstract:
Tropomyosin receptor kinase (TK) is encoded by the neurotrophic tyrosine receptor kinase genes (NTRK) 1, 2, and 3, whose activation plays an important role in cell cycle proliferation and survival. Fusions of one of these genes can lead to constitutive activation of TRK, which can potentially be oncogenic. NTRK fusions are commonly present in rare histologic tumor types. Among sarcomas, infantile fibrosarcoma shows NTRK fusion in more than 90% of the cases. Many other sarcoma types are also investigated for NTRK fusions. These fusions are druggable alteration of the agnostic type, meaning that all NTRK fused tumors can be treated with NTRK-inhibitors regardless of tumor type or tissue of origin. TRK-inhibitors have shown good response rates, with durable effects and limited side effects. Resistance to therapy will eventually occur in some cases, wherefore the next-generation TRK-inhibitors are introduced. The diagnosis of NTRK fused tumors, among them sarcomas, remains an issue, as many algorithms but no guidelines exist to date. Given the importance of this diagnosis, in this paper we aim to (1) analyze the histopathological features of sarcomas that correlate more often with NTRK fusions, (2) give an overview of the TRK-inhibitors and the problems that arise from resistance to the therapy, and (3) discuss the diagnostic algorithms of NTRK fused tumors with emphasis on sarcomas.
Insights
Neurotrophic tyrosine receptor kinase (NTRK) gene fusions drive cancer growth and can be targeted with NTRK-inhibitors. This study analyzes NTRK fusion-positive sarcomas, TRK-inhibitor therapies, and diagnostic challenges.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Neurotrophic tyrosine receptor kinase (NTRK) gene fusions are oncogenic drivers.
- NTRK fusions are found in rare tumor types, notably infantile fibrosarcoma.
- These fusions represent targetable alterations for agnostic therapy.
Purpose of the Study:
- To analyze histopathological features of sarcomas associated with NTRK fusions.
- To review TRK-inhibitor therapies and challenges of therapeutic resistance.
- To discuss diagnostic algorithms for NTRK fusion-positive tumors, focusing on sarcomas.
Main Methods:
- Histopathological analysis of sarcomas.
- Literature review of TRK-inhibitors and resistance mechanisms.
- Review of diagnostic algorithms for NTRK fusion detection.
Main Results:
- NTRK fusions are prevalent in specific sarcoma subtypes.
- TRK-inhibitors demonstrate efficacy but resistance can emerge.
- Diagnostic approaches for NTRK fusions are evolving but lack standardized guidelines.
Conclusions:
- Understanding histopathological correlations aids in identifying NTRK fusion-positive sarcomas.
- TRK-inhibitor therapy is effective, necessitating strategies for overcoming resistance.
- Standardized diagnostic guidelines are crucial for NTRK fusion-positive tumor management.
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