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Updated: Nov 10, 2025

Author Spotlight: Novel Assay for Studying B-Cell Responses in Multiple Sclerosis Research
Published on: December 1, 2023
The Interaction of Human and Epstein-Barr Virus miRNAs with Multiple Sclerosis Risk Loci
Ali Afrasiabi1,2, Nicole L Fewings2, Stephen D Schibeci2
1Systems Biology and Health Data Analytics Lab, The Graduate School of Biomedical Engineering, UNSW Sydney, Sydney, NSW 2052, Australia.
Abstract:
Although the causes of Multiple Sclerosis (MS) still remain largely unknown, multiple lines of evidence suggest that Epstein-Barr virus (EBV) infection may contribute to the development of MS. Here, we aimed to identify the potential contribution of EBV-encoded and host cellular miRNAs to MS pathogenesis. We identified differentially expressed host miRNAs in EBV infected B cells (LCLs) and putative host/EBV miRNA interactions with MS risk loci. We estimated the genotype effect of MS risk loci on the identified putative miRNA:mRNA interactions in silico. We found that the protective allele of MS risk SNP rs4808760 reduces the expression of hsa-mir-3188-3p. In addition, our analysis suggests that hsa-let-7b-5p may interact with ZC3HAV1 differently in LCLs compared to B cells. In vitro assays indicated that the protective allele of MS risk SNP rs10271373 increases ZC3HAV1 expression in LCLs, but not in B cells. The higher expression for the protective allele in LCLs is consistent with increased IFN response via ZC3HAV1 and so decreased immune evasion by EBV. Taken together, this provides evidence that EBV infection dysregulates the B cell miRNA machinery, including MS risk miRNAs, which may contribute to MS pathogenesis via interaction with MS risk genes either directly or indirectly.
Insights
Epstein-Barr virus (EBV) infection may influence Multiple Sclerosis (MS) development. This study reveals how EBV impacts microRNAs (miRNAs) in B cells, potentially contributing to MS pathogenesis through interactions with MS risk genes.
Area of Science:
- Immunology
- Virology
- Genetics
Background:
- The etiology of Multiple Sclerosis (MS) is largely unknown, but Epstein-Barr virus (EBV) infection is a suspected contributing factor.
- MicroRNAs (miRNAs) are small non-coding RNAs that regulate gene expression and are implicated in various diseases.
Purpose of the Study:
- To investigate the role of EBV-encoded and host cellular miRNAs in MS pathogenesis.
- To identify potential interactions between miRNAs and MS risk genes in the context of EBV infection.
Main Methods:
- Analysis of differentially expressed host miRNAs in EBV-infected B cells (lymphoblastoid cell lines, LCLs).
- In silico identification of host/EBV miRNA interactions with MS risk loci.
- In silico estimation of genotype effects of MS risk single nucleotide polymorphisms (SNPs) on miRNA:mRNA interactions.
- In vitro validation of SNP effects on gene expression in LCLs and B cells.
Main Results:
- The protective allele of MS risk SNP rs4808760 was found to reduce the expression of hsa-mir-3188-3p.
- hsa-let-7b-5p showed differential interaction with ZC3HAV1 in LCLs versus B cells.
- The protective allele of MS risk SNP rs10271373 increased ZC3HAV1 expression in LCLs, suggesting enhanced IFN response and reduced EBV immune evasion.
Conclusions:
- EBV infection dysregulates the miRNA machinery in B cells, including MS risk-associated miRNAs.
- These dysregulated miRNAs may contribute to MS pathogenesis by interacting with MS risk genes.
- Findings provide evidence for a mechanistic link between EBV, miRNA dysregulation, and MS development.
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Single Nucleotide Polymorphisms-SNPs
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