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Published on: June 21, 2018
Challenges in Clinicogenetic Correlations: One Phenotype - Many Genes
Rahul Gannamani1,2,3, Sterre van der Veen1,3, Martje van Egmond1,3
1Department of Neurology University of Groningen, University Medical Centre Groningen Groningen The Netherlands.
The "one-phenotype-many-genes" paradigm in movement disorders presents challenges in genetic diagnosis. Addressing these requires deep phenotyping, advanced bioinformatics, and collaborative clinical-molecular approaches for improved diagnostic yield.
Area of Science:
- Genetics
- Neurology
- Bioinformatics
Background:
- The traditional
- one-phenotype-one-gene
- model in movement disorders is increasingly replaced by the
- one-phenotype-many-genes
- paradigm due to next-generation sequencing (NGS) advancements.
- This shift complicates genotype-phenotype correlations and genetic diagnostics.
Purpose of the Study:
- To review the challenges and propose solutions for the
- one-phenotype-many-genes
- paradigm in movement disorder diagnosis.
- To outline future directions for improving genetic diagnostic yield.
Main Methods:
- A scoping review was conducted to examine various aspects of identifying molecular causes for movement disorder phenotypes.
Main Results:
- Key challenges include lack of gold standards, overlapping clinical spectra, inconsistent classification, patient selection for genetic testing, variant interpretation issues, and incomplete gene lists.
- Proposed solutions involve deep phenotyping, genotype-phenotype integration, phenotype-specific algorithms, bioinformatic tools, and clinical-laboratory collaboration.
Conclusions:
- Next-generation sequencing (NGS) offers significant potential but requires further development to enhance genetic diagnostic yield in movement disorders.
- Future research should focus on post-NGS phenotyping, cohort analyses, genotype-phenotype integration, and gene networks to accelerate gene discovery and understand disease biology.
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