Related Experiment Video
Updated: Nov 10, 2025

07:47
High-resolution Patterned Biofilm Deposition Using pDawn-Ag43
Published on: October 23, 2018
9.6K
Search, access, and explore life science nanopublications on the Web
Fabio Giachelle1, Dennis Dosso1, Gianmaria Silvello1
1Department of Information Engineering, University of Padua, Padova, Italy.
Peerj. Computer Science
|April 5, 2021
Summary
Scientists can now easily find and use nanopublications, which are structured scientific facts, thanks to the new NanoWeb application. This tool enhances discovery and reuse of life science data available on the web.
Area of Science:
- Life Science
- Bioinformatics
- Semantic Web Technologies
Background:
- Millions of nanopublications (RDF graphs of scientific facts) exist, primarily in life sciences.
- Nanopublications aim to improve scientific fact discovery and reuse but are underutilized due to accessibility issues.
- Current challenges include difficulty in finding, citing, and understanding nanopublication content.
Purpose of the Study:
- To address the lack of services for seeking, finding, and understanding nanopublication content.
- To introduce the NanoWeb application as a unified platform for accessing and exploring nanopublications.
- To facilitate the seamless search, access, exploration, and reuse of web-based nanopublications.
Main Methods:
- Development of the NanoWeb application, a unified access point for nanopublications.
- Focus on the life science domain, leveraging the largest available collection of nanopublications.
- Implementation of search functionalities over graph data and connections to evidence papers and curated databases.
Main Results:
- NanoWeb provides a unified platform for accessing and exploring nanopublications.
- The application enables efficient searching of nanopublication content.
- It offers visual and intuitive exploration of the scientific fact relation network.
Conclusions:
- The NanoWeb application significantly improves the accessibility and usability of nanopublications.
- It empowers scientists to discover, explore, and reuse scientific facts more effectively.
- This tool has the potential to increase the adoption and impact of nanopublications in the life sciences.
Related Concept Videos
Nucleic acids
183.4K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
183.4K
Nitric Oxide Signaling Pathway
5.6K
Nitric oxide (NO), an inorganic gas, acts as a potent second messenger in most animal and plant tissues. NO diffuses out of the cells that produce it and enters the neighboring cells to generate a downstream response. NO synthase (NOS) catalyzes NO production by the deamination of the amino acid arginine. There are three isoforms of NOS. Endothelial cells have endothelial NOS (eNOS), nerve and muscle cells have neuronal NOS (nNOS), and macrophages produce inducible NOS (iNOS) upon exposure...
5.6K
The DNA Helix
151.8K
Overview
151.8K
Synthetic Biology
5.1K
Synthetic biology is an interdisciplinary science that involves using principles from disciplines such as engineering, molecular biology, cell biology, and systems biology. It involves remodeling existing organisms from nature or constructing completely new synthetic organisms for applications such as protein or enzyme production, bioremediation, value-added macromolecule production, and the addition of desirable traits to crops, to name a few.
Golden rice
Golden rice is a genetically modified...
Golden rice
Golden rice is a genetically modified...
5.1K
Free Energy
50.6K
Free energy—abbreviated as G for the scientist Gibbs who discovered it—is a measurement of useful energy that can be extracted from a reaction to do work. It is the energy in a chemical reaction that is available after entropy is accounted for. Reactions that take in energy are considered endergonic and reactions that release energy are exergonic. Plants carry out endergonic reactions by taking in sunlight and carbon dioxide to produce glucose and oxygen. Animals, in turn, break...
50.6K
Cell-surface Signaling
53.0K
Hormones—or any molecule that binds to a receptor, known as a ligand—that are lipid-insoluble (water-soluble) are not able to diffuse across the cell membrane. In order to be able to affect a cell without entering it, these hormones bind to receptors on the cell membrane. When a first messenger, a hormone, binds to a receptor, a signal cascade is set off, causing second messengers, proteins inside the cell, to become activated, resulting in downstream effects.
53.0K

