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Updated: Nov 10, 2025

Large-scale Reconstructions and Independent, Unbiased Clustering Based on Morphological Metrics to Classify Neurons in Selective Populations
Published on: February 15, 2017
Renyi entropy driven hierarchical graph clustering
Frédérique Oggier1, Anwitaman Datta2
1Division of Mathematical Sciences, Nanyang Technological University, Singapore, Singapore.
Abstract:
This article explores a graph clustering method that is derived from an information theoretic method that clusters points in relying on Renyi entropy, which involves computing the usual Euclidean distance between these points. Two view points are adopted: (1) the graph to be clustered is first embedded into for some dimension d so as to minimize the distortion of the embedding, then the resulting points are clustered, and (2) the graph is clustered directly, using as distance the shortest path distance for undirected graphs, and a variation of the Jaccard distance for directed graphs. In both cases, a hierarchical approach is adopted, where both the initial clustering and the agglomeration steps are computed using Renyi entropy derived evaluation functions. Numerical examples are provided to support the study, showing the consistency of both approaches (evaluated in terms of F-scores).
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