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Updated: Nov 10, 2025

Three-Dimensional Shape Modeling and Analysis of Brain Structures
Published on: November 14, 2019
Shared heritability of human face and brain shape.
Sahin Naqvi1,2, Yoeri Sleyp3, Hanne Hoskens3,4
1Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, CA, USA. naqvi@stanford.edu.
Genetic links between brain and face shape exist, with 76 shared loci identified. This early developmental interplay doesn't appear to influence cognitive traits later in life.
Area of Science:
- Neurogenetics
- Developmental Biology
- Human Genetics
Background:
- Coordinated development between the brain and face is suggested by model organisms and clinical genetics.
- The role of this developmental link in common genetic variation is not well understood.
Purpose of the Study:
- To investigate the genetic underpinnings of the relationship between brain and face shape.
- To identify shared genetic loci influencing both cortical surface morphology and facial structure.
Main Methods:
- A multivariate genome-wide association study (GWAS) was conducted on 19,644 individuals of European ancestry.
- Cortical surface morphology and facial shape were analyzed to identify associated genomic loci.
Main Results:
- 472 genomic loci influencing brain shape were identified, with 76 also linked to face shape.
- Shared loci involve transcription factors in craniofacial development and signaling pathways in brain-face cross-talk.
- Brain shape heritability is enriched near regulatory regions active in forebrain organoids and facial progenitors.
- No significant overlap was found between shared brain-face GWAS signals and variants affecting behavioral-cognitive traits.
Conclusions:
- The face and brain mutually influence each other during early embryogenesis via structural effects and paracrine signaling.
- This early developmental interplay does not seem to impact later brain development related to cognitive function.
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