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Updated: Nov 9, 2025

Atomic Scale Structural Studies of Macromolecular Assemblies by Solid-state Nuclear Magnetic Resonance Spectroscopy
Published on: September 17, 2017
Transfer Learning from Simulation to Experimental Data: NMR Chemical Shift Predictions
Herim Han1,2, Sunghwan Choi1
1Division of National Supercomputing, Korea Institute of Science and Technology Information, 245 Daehak-Ro, Yuseong-Gu, Daejeon 34141, Republic of Korea.
Abstract:
An accurate prediction of chemical shifts (δ) to elucidate molecular structures has been a challenging problem. Recently, noble machine learning architectures achieve accurate prediction performance, but the difficulty of building a huge chemical database limits the applicability of machine learning approaches. In this work, we demonstrate that the prior knowledge gained from the simulation database is successfully transferred into the problem of predicting an experimentally measured δ. Although both simulation and experimental databases are vastly different in chemical perspectives, reliable accuracy for δ is achieved by additional training with randomly sampled small numbers of experimental data. Furthermore, the prior knowledge allows us to successfully train the model on the more focused chemical space that the experimental database sparsely covers. The proposed approach, the knowledge transfer from the simulation database, can be utilized to enhance the usability of the local experimental database.
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