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Updated: Nov 9, 2025

Assessment of Global DNA Double-Strand End Resection using BrdU-DNA Labeling coupled with Cell Cycle Discrimination Imaging
Published on: April 28, 2021
Targeting the nucleotide salvage factor DNPH1 sensitizes BRCA-deficient cells to PARP inhibitors
Kasper Fugger1, Ilirjana Bajrami2, Mariana Silva Dos Santos2
1The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK. stephen.west@crick.ac.uk kasper.fugger@crick.ac.uk.
Abstract:
Mutations in the BRCA1 or BRCA2 tumor suppressor genes predispose individuals to breast and ovarian cancer. In the clinic, these cancers are treated with inhibitors that target poly(ADP-ribose) polymerase (PARP). We show that inhibition of DNPH1, a protein that eliminates cytotoxic nucleotide 5-hydroxymethyl-deoxyuridine (hmdU) monophosphate, potentiates the sensitivity of BRCA-deficient cells to PARP inhibitors (PARPi). Synthetic lethality was mediated by the action of SMUG1 glycosylase on genomic hmdU, leading to PARP trapping, replication fork collapse, DNA break formation, and apoptosis. BRCA1-deficient cells that acquired resistance to PARPi were resensitized by treatment with hmdU and DNPH1 inhibition. Because genomic hmdU is a key determinant of PARPi sensitivity, targeting DNPH1 provides a promising strategy for the hypersensitization of BRCA-deficient cancers to PARPi therapy.
Insights
Targeting DNPH1 enhances cancer therapy for BRCA-deficient patients. Inhibiting DNPH1 boosts sensitivity to PARP inhibitors (PARPi) by increasing cytotoxic nucleotide levels, leading to cancer cell death.
Area of Science:
- Genetics and Genomics
- Cancer Biology
- Drug Discovery
Background:
- BRCA1/BRCA2 mutations increase breast and ovarian cancer risk.
- Poly(ADP-ribose) polymerase inhibitors (PARPi) are used to treat these cancers.
Purpose of the Study:
- To investigate if inhibiting DNPH1 can enhance the efficacy of PARPi in BRCA-deficient cancers.
- To explore the mechanism of synthetic lethality induced by DNPH1 inhibition and PARPi.
Main Methods:
- Utilizing cell culture models of BRCA-deficient cancers.
- Employing DNPH1 inhibition and 5-hydroxymethyl-deoxyuridine (hmdU) treatment.
- Assessing sensitivity to PARP inhibitors (PARPi) and analyzing DNA damage response pathways.
Main Results:
- DNPH1 inhibition potentiates PARPi sensitivity in BRCA-deficient cells.
- Genomic accumulation of hmdU triggers synthetic lethality via PARP trapping and replication fork collapse.
- DNPH1 inhibition resensitizes PARPi-resistant cells.
Conclusions:
- DNPH1 inhibition is a promising strategy to potentiate PARPi therapy in BRCA-deficient cancers.
- Targeting DNPH1 offers a novel approach to overcome PARPi resistance.
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