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Updated: Nov 9, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
The microbiome and systemic sclerosis: A review of current evidence
Tze Chin Tan1, Maria Noviani1, Ying Ying Leung1
1Department of Rheumatology & Immunology, Singapore General Hospital, Singapore; Duke-NUS Medical School, Singapore.
Abstract:
Systemic sclerosis (SSc) is characterized by immune dysregulation, vasculopathy, and fibrosis of multiple organs. The gastrointestinal (GI) tract is the most common internal organ manifestation, which contributes to significant morbidity and mortality in patients with SSc. Emerging reports have identified unique microbial taxa alterations in the GI microbiome of patients with SSc as compared to healthy controls (HC). These taxa alterations include differences at the phyla (e.g., Bacteroidetes) and genera (e.g., Bacteroides, Clostridium, Faecalibacterium, and Lactobacillus) level. In addition, some genera have been associated with more severe GI symptoms (e.g., Prevotella and Akkermansia). This review summarizes the current evidence on factors influencing the GI microbiome, GI microbiome alterations in SSc as compared to HC, and in SSc subgroups according to disease manifestations. Current exploration in therapeutic interventions that target the GI microbiome is discussed.
Insights
Systemic sclerosis (SSc) patients show distinct gut microbiome changes compared to healthy individuals. These alterations may correlate with disease severity and offer potential therapeutic targets.
Area of Science:
- Microbiology
- Immunology
- Gastroenterology
Background:
- Systemic sclerosis (SSc) involves immune dysregulation, vasculopathy, and fibrosis, frequently affecting the gastrointestinal (GI) tract.
- GI manifestations in SSc significantly contribute to patient morbidity and mortality.
- The GI microbiome is increasingly recognized as a factor in SSc pathogenesis.
Purpose of the Study:
- To review factors influencing the GI microbiome in SSc.
- To summarize observed GI microbiome alterations in SSc patients compared to healthy controls (HC).
- To discuss potential therapeutic interventions targeting the SSc GI microbiome.
Main Methods:
- Literature review of studies investigating the GI microbiome in SSc.
- Comparative analysis of microbial taxa in SSc patients versus HC.
- Examination of associations between specific microbial genera and GI symptoms in SSc.
Main Results:
- SSc patients exhibit unique alterations in GI microbial taxa, including differences in phyla like Bacteroidetes.
- Specific genera such as Bacteroides, Clostridium, Faecalibacterium, and Lactobacillus are altered in SSc.
- Genera like Prevotella and Akkermansia have been linked to more severe GI symptoms in SSc.
Conclusions:
- The GI microbiome is significantly altered in systemic sclerosis patients.
- Microbiome alterations may be associated with disease manifestations and symptom severity.
- Targeting the GI microbiome presents a promising avenue for SSc therapeutic strategies.
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