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Updated: Nov 9, 2025

Time-Lapse Video Microscopy for Assessment of EYFP-Parkin Aggregation as a Marker for Cellular Mitophagy
Published on: May 4, 2016
Parkin-independent mitophagy via Drp1-mediated outer membrane severing and inner membrane ubiquitination
Yumiko Oshima1,2, Etienne Cartier1,2, Liron Boyman1,3
1Center for Biomedical Engineering and Technology, University of Maryland School of Medicine, Baltimore, MD.
Abstract:
Here, we report that acute reduction in mitochondrial translation fidelity (MTF) causes ubiquitination of the inner mitochondrial membrane (IMM) proteins, including TRAP1 and CPOX, which occurs selectively in mitochondria with a severed outer mitochondrial membrane (OMM). Ubiquitinated IMM recruits the autophagy machinery. Inhibiting autophagy leads to increased accumulation of mitochondria with severed OMM and ubiquitinated IMM. This process occurs downstream of the accumulation of cytochrome c/CPOX in a subset of mitochondria heterogeneously distributed throughout the cell ("mosaic distribution"). Formation of mosaic mitochondria, OMM severing, and IMM ubiquitination require active mitochondrial translation and mitochondrial fission, but not the proapoptotic proteins Bax and Bak. In contrast, in Parkin-overexpressing cells, MTF reduction does not lead to the severing of the OMM or IMM ubiquitination, but it does induce Drp1-independent ubiquitination of the OMM. Furthermore, high-cytochrome c/CPOX mitochondria are preferentially targeted by Parkin, indicating that in the context of reduced MTF, they are mitophagy intermediates regardless of Parkin expression. In sum, Parkin-deficient cells adapt to mitochondrial proteotoxicity through a Drp1-mediated mechanism that involves the severing of the OMM and autophagy targeting ubiquitinated IMM proteins.
Insights
Reduced mitochondrial translation fidelity triggers ubiquitination of inner mitochondrial membrane proteins, initiating autophagy for damaged mitochondria removal in Parkin-deficient cells. This pathway involves outer mitochondrial membrane severing and selective targeting of specific mitochondria.
Area of Science:
- Cell Biology
- Mitochondrial Biology
- Autophagy Research
Background:
- Mitochondrial dysfunction is implicated in various diseases.
- Mitochondrial protein quality control is crucial for cellular health.
- Mechanisms of selective mitochondrial degradation are actively investigated.
Purpose of the Study:
- To investigate the cellular response to reduced mitochondrial translation fidelity (MTF).
- To elucidate the role of protein ubiquitination and autophagy in managing mitochondrial damage.
- To compare the response in Parkin-deficient versus Parkin-overexpressing cells.
Main Methods:
- Analysis of ubiquitination of inner mitochondrial membrane (IMM) proteins.
- Investigation of outer mitochondrial membrane (OMM) severing.
- Assessment of autophagy recruitment and inhibition.
- Study of mitochondrial distribution and Parkin targeting.
Main Results:
- Reduced MTF causes selective IMM protein ubiquitination in mitochondria with severed OMM.
- Ubiquitinated IMM recruits autophagy machinery, and its inhibition causes accumulation of damaged mitochondria.
- This process requires active mitochondrial translation and fission, independent of Bax/Bak.
- Parkin-deficient cells utilize OMM severing and autophagy for damaged mitochondria, while Parkin-overexpressing cells show Drp1-independent OMM ubiquitination.
Conclusions:
- Parkin-deficient cells employ a Drp1-mediated pathway involving OMM severing and autophagy to clear mitochondria with reduced MTF.
- Mitochondria with high cytochrome c/CPOX are mitophagy intermediates.
- This study reveals a novel adaptive mechanism for mitochondrial proteotoxicity.
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