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Published on: January 31, 2018
Recruitment of KMT2C/MLL3 to DNA Damage Sites Mediates DNA Damage Responses and Regulates PARP Inhibitor Sensitivity
Antao Chang1,2, Liang Liu1,3, Justin M Ashby1
1Department of Cancer Biology, Wake Forest Baptist Comprehensive Cancer Center, Wake Forest Baptist Medical Center, Medical Center Blvd, Winston-Salem, North Carolina.
Abstract:
When recruited to promoters, histone 3 lysine 4 (H3K4) methyltransferases KMT2 (KMT2A-D) activate transcription by opening chromatin through H3K4 methylation. Here, we report that KMT2 mutations occur frequently in non-small cell lung cancer (NSCLC) and are associated with high mutation loads and poor survival. KMT2C regulated DNA damage responses (DDR) through direct recruitment to DNA damage sites by Ago2 and small noncoding DNA damage response RNA, where it mediates H3K4 methylation, chromatin relaxation, secondary recruitment of DDR factors, and amplification of DDR signals along chromatin. Furthermore, by disrupting homologous recombination (HR)-mediated DNA repair, KMT2C/D mutations sensitized NSCLC to Poly(ADP-ribose) polymerase inhibitors (PARPi), whose efficacy is unclear in NSCLC due to low BRCA1/2 mutation rates. These results demonstrate a novel, transcription-independent role of KMT2C in DDR and identify high-frequency KMT2C/D mutations as much-needed biomarkers for PARPi therapies in NSCLC and other cancers with infrequent BRCA1/2 mutations. SIGNIFICANCE: This study uncovers a critical role for KMT2C in DDR via direct recruitment to DNA damage sites, identifying high-frequency KMT2C/D mutations as biomarkers for response to PARP inhibition in cancer.
Insights
Mutations in KMT2 genes are common in non-small cell lung cancer (NSCLC). KMT2C plays a key role in DNA damage response, and KMT2C/D mutations predict response to PARP inhibitors in NSCLC.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Histone 3 lysine 4 (H3K4) methyltransferases KMT2 (KMT2A-D) typically activate transcription by methylating H3K4.
- KMT2 gene mutations are frequently observed in non-small cell lung cancer (NSCLC).
Purpose of the Study:
- To investigate the role of KMT2 mutations in NSCLC.
- To explore the function of KMT2C in DNA damage response (DDR).
- To identify KMT2C/D mutations as biomarkers for PARP inhibitor (PARPi) therapy in NSCLC.
Main Methods:
- Analysis of KMT2 mutation frequency in NSCLC.
- Investigating KMT2C recruitment to DNA damage sites.
- Assessing the impact of KMT2C/D mutations on homologous recombination (HR) repair.
- Evaluating PARPi sensitivity in NSCLC with KMT2C/D mutations.
Main Results:
- KMT2 mutations are frequent in NSCLC, correlating with high mutation loads and poor survival.
- KMT2C is recruited to DNA damage sites, mediating H3K4 methylation, chromatin relaxation, and amplifying DDR signals.
- KMT2C/D mutations impair HR-mediated DNA repair, sensitizing NSCLC to PARPi.
- KMT2C/D mutations serve as biomarkers for PARPi efficacy in NSCLC, particularly when BRCA1/2 mutations are rare.
Conclusions:
- KMT2C has a novel, transcription-independent role in DNA damage response.
- High-frequency KMT2C/D mutations are significant biomarkers for PARPi therapy in NSCLC and other cancers.
- This finding expands the utility of PARPi beyond BRCA1/2-mutated cancers.
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