A double on the Rocs with a twist: Rocaglamide A targets multiple DEAD-box helicases to inhibit translation

Daisy J DiVita1, Michael G Kearse1

  • 1The Ohio State Biochemistry Program, The Ohio State University, Columbus, OH 43210, USA; Department of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH 43210, USA; Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA.

Cell Chemical Biology
|April 16, 2021
PubMed

Insights

Rocaglamide A (RocA) now targets eIF4A2 and DDX3X, turning these DEAD-box helicases into translation repressors. Cancer cell sensitivity to RocA depends on the levels of eIF4A and DDX3X.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Cancer Research

Background:

  • Rocaglamide A (RocA) is a natural product with known biological activities.
  • DEAD-box helicases are crucial for various cellular processes, including translation.
  • Understanding RocA's molecular targets is key to its therapeutic potential.

Purpose of the Study:

  • To identify novel protein targets of rocaglamide A.
  • To investigate the mechanism by which RocA affects translation.
  • To determine the role of specific DEAD-box helicases in cancer cell sensitivity to RocA.

Main Methods:

  • Affinity purification coupled with mass spectrometry to identify RocA-binding proteins.
  • Biochemical assays to assess the effect of RocA on helicase activity.
  • Western blotting and cell viability assays to correlate protein levels with drug sensitivity.

Main Results:

  • Chen et al. identified eukaryotic initiation factor 4A2 (eIF4A2) and DEAD-box helicase 3 X-linked (DDX3X) as novel targets of RocA.
  • RocA treatment converts these DEAD-box helicases into dominant-negative translation repressors.
  • Cancer cell sensitivity to RocA was found to be directly dependent on the expression levels of eIF4A2 and DDX3X.

Conclusions:

  • RocA's target spectrum is expanded to include eIF4A2 and DDX3X.
  • The findings provide a mechanistic link between RocA, translation regulation, and cancer cell fate.
  • Expression levels of eIF4A2 and DDX3X may serve as biomarkers for RocA efficacy in cancer therapy.

Related Concept Videos

Leaky Scanning02:28

Leaky Scanning

During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.4K
Initiation of Translation02:33

Initiation of Translation

Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
35.9K
Initiation of Translation02:33

Initiation of Translation

7.2K
Improving Translational Accuracy02:07

Improving Translational Accuracy

Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
12.1K
Termination of Translation01:44

Termination of Translation

The large ribosomal subunit has several important structures essential to translation. These include the peptidyl transferase center (PTC) - which is the site where the peptide bond is formed - and a large, internal, water-filled tube through which the nascent polypeptide moves. This latter structure is called the Peptide Exit Tunnel, and it begins at the PTC and spans the body of the large ribosomal subunit. During translation, as the nascent polypeptide chain is synthesized, it passes through...
26.5K
Eukaryotic Transcription Inhibitors01:52

Eukaryotic Transcription Inhibitors

Certain biochemical processes, such as embryonic development and cell growth regulation, depend on the repression of specific genes. DNA binding proteins known as eukaryotic transcription inhibitors regulate the repression of gene expression in eukaryotes. The presence of these inhibitors at the required location and time in the cell is triggered by the presence of hormones and additional signals from other cells.
Eukaryotic transcription inhibitors usually contain two distinct domains, a...
10.3K