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Rapid Open-Source SNP-Based Clustering Offers an Alternative to Core Genome MLST for Outbreak Tracing in a Hospital

Judit Szarvas1, Mette Damkjaer Bartels2,3, Henrik Westh3,4

  • 1Research Group for Genomic Epidemiology, Division for Global Surveillance, National Food Institute, Technical University of Denmark, Lyngby, Denmark.

Frontiers in Microbiology
|April 19, 2021
PubMed

Keywords:
MRSAcgMLSTnosocomial infectionspathogenssurveillancewhole-genome sequencing

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