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Formation of Ordered Biomolecular Structures by the Self-assembly of Short Peptides
Published on: November 21, 2013
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CATCH Peptides Coassemble into Structurally Heterogeneous β-Sheet Nanofibers with Little Preference to β-Strand
Kong M Wong1, Qing Shao2, Yiming Wang3
1School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332, United States.
The Journal of Physical Chemistry. B
|April 20, 2021
Summary
Coassembling peptides form structurally diverse nanofibers, not ideal structures. Understanding sequence-structure links in CATCH peptides advances biomaterial design.
Area of Science:
- Biomaterials Science
- Nanotechnology
- Structural Biology
Background:
- Coassembling peptides offer enhanced control over nanostructured biomaterials compared to self-assembling peptides.
- Limited understanding exists regarding how amino acid sequences dictate coassembled nanofiber structures.
- Previous studies on CATCH peptides revealed self-associated nearest neighbors, deviating from ideal coassembly.
Purpose of the Study:
- To investigate the structural heterogeneity and β-strand alignment within coassembled CATCH peptide nanofibers.
- To compare the structural characteristics of CATCH nanofibers with other coassembling systems like King-Webb peptides.
- To identify sequence-to-structure relationships governing precise coassembled β-sheet nanostructures.
Main Methods:
- Solid-state Nuclear Magnetic Resonance (NMR) spectroscopy.
- Isotope-edited Fourier-Transform Infrared (FTIR) spectroscopy.
- Coarse-grained molecular dynamics (MD) simulations.
Main Results:
- CATCH peptides coassemble into structurally heterogeneous nanofibers, confirmed by both experimental and computational approaches.
- Within β-sheet nanofibers, β-strands exhibit varied nearest-neighbor alignments: in-register parallel, in-register antiparallel, and out-of-register.
- CATCH nanofibers display greater structural heterogeneity compared to King-Webb peptide nanofibers.
Conclusions:
- Coassembled CATCH peptide nanofibers are structurally heterogeneous, with diverse β-strand alignments.
- Comparing CATCH and King-Webb peptide sequences provides insights into sequence-encoded structural control.
- Further unraveling these sequence-structure relationships is crucial for designing precise coassembled β-sheet nanostructures.
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