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LASSO type penalized spline regression for binary data.

Muhammad Abu Shadeque Mullah1, James A Hanley1, Andrea Benedetti2,3

  • 1Department of Epidemiology, Biostatistics and Occupational Health, McGill University, Montreal, Canada.

BMC Medical Research Methodology
|April 25, 2021
PubMed
Summary
This summary is machine-generated.

The least absolute shrinkage and selection operator (LASSO) penalty in semiparametric mixed models (SPMMs) effectively captures complex dose-response relationships, outperforming traditional ridge penalties for smoothing correlated data.

Keywords:
Generalized linear mixed modelsLeast absolute shrinkage and selection operator (LASSO)Markov chain Monte CarloPenalized splinesRidge regression

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Area of Science:

  • Statistics
  • Biostatistics
  • Computational Statistics

Background:

  • Generalized linear mixed models (GLMMs) are adapted for data smoothing via semiparametric mixed models (SPMMs).
  • Ridge regression penalty in SPMMs is equivalent to assuming normal distribution for random knot coefficients.
  • LASSO penalty is introduced in SPMMs by assuming Laplace double exponential distribution for knot coefficients.

Purpose of the Study:

  • To introduce and evaluate the LASSO penalty within the SPMM framework for data smoothing.
  • To compare the performance of LASSO versus ridge penalties in SPMMs for binary data analysis.
  • To apply the LASSO-SPMM method to model the smoking pack-years and COPD risk relationship.

Main Methods:

  • Bayesian approach utilizing Markov Chain Monte Carlo (MCMC) for model fitting.
  • Simulation studies to compare LASSO and ridge penalty performance in SPMMs.
  • Application to real-world data on smoking and chronic obstructive pulmonary disease (COPD).

Main Results:

  • LASSO penalty demonstrates comparable performance to ridge penalty for simple associations.
  • LASSO penalty outperforms ridge penalty for complex or linear association shapes.
  • The proposed method successfully generates smooth curves from correlated data.

Conclusions:

  • LASSO penalty in SPMMs is superior for capturing complex dose-response associations.
  • SPMMs with LASSO penalty offer an effective approach for smoothing and analyzing correlated data with complex relationships.
  • The method provides a valuable tool for epidemiological studies, such as quantifying smoking impact on COPD risk.