Super-resolution fluorescence microscopy by line-scanning with an unmodified two-photon microscope
Related Experiment Video
Updated: Nov 8, 2025

Conducting Multiple Imaging Modes with One Fluorescence Microscope
Published on: October 28, 2018
Christian Pilger1, Jakub Pospíšil1,2, Marcel Müller1
1Biomolecular Photonics, Department of Physics, University of Bielefeld, Bielefeld, Germany.
Abstract:
Fluorescence-based microscopy as one of the standard tools in biomedical research benefits more and more from super-resolution methods, which offer enhanced spatial resolution allowing insights into new biological processes. A typical drawback of using these methods is the need for new, complex optical set-ups. This becomes even more significant when using two-photon fluorescence excitation, which offers deep tissue imaging and excellent z-sectioning. We show that the generation of striped-illumination patterns in two-photon laser scanning microscopy can readily be exploited for achieving optical super-resolution and contrast enhancement using open-source image reconstruction software. The special appeal of this approach is that even in the case of a commercial two-photon laser scanning microscope no optomechanical modifications are required to achieve this modality. Modifying the scanning software with a custom-written macro to address the scanning mirrors in combination with rapid intensity switching by an electro-optic modulator is sufficient to accomplish the acquisition of two-photon striped-illumination patterns on an sCMOS camera. We demonstrate and analyse the resulting resolution improvement by applying different recently published image resolution evaluation procedures to the reconstructed filtered widefield and super-resolved images. This article is part of the Theo Murphy meeting issue 'Super-resolution structured illumination microscopy (part 1)'.
Related Concept Videos
Super-resolution Fluorescence Microscopy
Confocal Fluorescence Microscopy
Three-Dimensional Microscopy in Microbiology
Two-Dimensional Microscopy in Microbiology

