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Threespine Stickleback: A Model System For Evolutionary Genomics.

Kerry Reid1, Michael A Bell2, Krishna R Veeramah1

  • 1Department of Ecology and Evolution, Stony Brook University, Stony Brook, New York 11794, USA;

Annual Review of Genomics and Human Genetics
|April 28, 2021
PubMed
Summary
This summary is machine-generated.

The threespine stickleback is a model organism for studying parallel evolution due to its freshwater adaptations and diverse ecotypes. Its genomic resources enable research into the genetic basis of complex traits.

Keywords:
Gasterosteus aculeatusbehaviorgenetic architecturehost–microbiome interactionsparasitesrapid parallel adaptationstanding genetic variationvertebrate evolution

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Area of Science:

  • Evolutionary biology
  • Genomics
  • Ecology

Background:

  • The oceanic threespine stickleback repeatedly adapts to freshwater environments, creating distinct ecotypes.
  • These ecotypes exhibit diverse phenotypic traits and are amenable to laboratory crosses and genetic analyses.

Purpose of the Study:

  • To highlight the threespine stickleback as a premier model organism for studying parallel evolution and adaptation.
  • To review recent advancements in understanding the genomic basis of complex traits using this model system.

Main Methods:

  • Utilizing existing genomic resources such as linkage maps and a reference genome.
  • Employing quantitative trait locus (QTL) analyses.
  • Investigating host-microbiome and host-parasite interactions.

Main Results:

  • Threespine sticklebacks facilitate insights into the genomic basis of adaptation in vertebrates.
  • Genomic studies have identified genetic changes controlling diverse traits, including behavior.
  • The model system is effective for complex trait research.

Conclusions:

  • The threespine stickleback is a versatile and powerful "supermodel" for evolutionary genomics research.
  • Its adaptability and genomic resources offer unique opportunities to explore evolutionary processes.
  • Future research can leverage this model for complex trait and interaction studies.