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Author Spotlight: Recreating Melanoma Complexity with Patient-Derived Organoids for Immunotherapy Evaluation
Published on: September 6, 2024
Melanoma dedifferentiation induced by IFN-γ epigenetic remodeling in response to anti-PD-1 therapy
Yeon Joo Kim1,2, Katherine M Sheu1,3, Jennifer Tsoi1
1Department of Medicine.
Abstract:
Melanoma dedifferentiation has been reported to be a state of cellular resistance to targeted therapies and immunotherapies as cancer cells revert to a more primitive cellular phenotype. Here, we show that, counterintuitively, the biopsies of patient tumors that responded to anti-programmed cell death 1 (anti-PD-1) therapy had decreased expression of melanocytic markers and increased neural crest markers, suggesting treatment-induced dedifferentiation. When modeling the effects in vitro, we documented that melanoma cell lines that were originally differentiated underwent a process of neural crest dedifferentiation when continuously exposed to IFN-γ, through global chromatin landscape changes that led to enrichment in specific hyperaccessible chromatin regions. The IFN-γ-induced dedifferentiation signature corresponded with improved outcomes in patients with melanoma, challenging the notion that neural crest dedifferentiation is entirely an adverse phenotype.
Insights
Melanoma dedifferentiation, marked by increased neural crest markers, surprisingly correlated with positive responses to anti-programmed cell death 1 (anti-PD-1) therapy. This suggests a beneficial role for this cellular change in melanoma treatment outcomes.
Area of Science:
- Oncology
- Cancer Biology
- Immunotherapy
Background:
- Melanoma dedifferentiation is often linked to therapy resistance.
- Cancer cells may revert to a primitive phenotype.
Purpose of the Study:
- To investigate the role of melanoma dedifferentiation in response to anti-programmed cell death 1 (anti-PD-1) therapy.
- To challenge the view of dedifferentiation as solely an adverse phenotype.
Main Methods:
- Analysis of patient tumor biopsies responding to anti-PD-1 therapy.
- In vitro modeling of melanoma cell lines exposed to interferon-gamma (IFN-γ).
- Assessment of global chromatin landscape changes and marker expression.
Main Results:
- Patient tumors responding to anti-PD-1 therapy showed decreased melanocytic and increased neural crest markers.
- In vitro, continuous IFN-γ exposure induced neural crest dedifferentiation in melanoma cells.
- Dedifferentiation involved global chromatin changes and hyperaccessible chromatin regions.
- The IFN-γ-induced dedifferentiation signature correlated with improved patient outcomes.
Conclusions:
- Treatment-induced melanoma dedifferentiation, characterized by neural crest markers, is associated with positive responses to anti-PD-1 immunotherapy.
- This finding challenges the established notion that neural crest dedifferentiation is exclusively a detrimental process in cancer.
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