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Updated: Nov 7, 2025

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
HDAC6 Signaling at Primary Cilia Promotes Proliferation and Restricts Differentiation of Glioma Cells
Ping Shi1, Lan B Hoang-Minh2,3, Jia Tian1
1Department of Neuroscience, University of Florida College of Medicine, Gainesville, FL 32610, USA.
Abstract:
Histone deacetylase 6 (HDAC6) is an emerging therapeutic target that is overexpressed in glioblastoma when compared to other HDACs. HDAC6 catalyzes the deacetylation of alpha-tubulin and mediates the disassembly of primary cilia, a process required for cell cycle progression. HDAC6 inhibition disrupts glioma proliferation, but whether this effect is dependent on tumor cell primary cilia is unknown. We found that HDAC6 inhibitors ACY-1215 (1215) and ACY-738 (738) inhibited the proliferation of multiple patient-derived and mouse glioma cells. While both inhibitors triggered rapid increases in acetylated alpha-tubulin (aaTub) in the cytosol and led to increased frequencies of primary cilia, they unexpectedly reduced the levels of aaTub in the cilia. To test whether the antiproliferative effects of HDAC6 inhibitors are dependent on tumor cell cilia, we generated patient-derived glioma lines devoid of cilia through depletion of ciliogenesis genes ARL13B or KIF3A. At low concentrations, 1215 or 738 did not decrease the proliferation of cilia-depleted cells. Moreover, the differentiation of glioma cells that was induced by HDAC6 inhibition did not occur after the inhibition of cilia formation. These data suggest HDAC6 signaling at primary cilia promotes the proliferation of glioma cells by restricting their ability to differentiate. Surprisingly, overexpressing HDAC6 did not reduce cilia length or the frequency of ciliated glioma cells, suggesting other factors are required to control HDAC6-mediated cilia disassembly in glioma cells. Collectively, our findings suggest that HDAC6 promotes the proliferation of glioma cells through primary cilia.
Insights
Histone deacetylase 6 (HDAC6) inhibitors block glioma cell proliferation by impacting primary cilia. This suggests HDAC6 signaling at cilia promotes tumor growth by preventing cell differentiation.
Area of Science:
- Oncology
- Cell Biology
- Molecular Biology
Background:
- Histone deacetylase 6 (HDAC6) is overexpressed in glioblastoma.
- HDAC6 regulates alpha-tubulin acetylation and primary cilia disassembly, impacting cell cycle progression.
- The role of tumor cell primary cilia in HDAC6 inhibitor efficacy is unclear.
Purpose of the Study:
- To investigate if HDAC6 inhibitor effects on glioma proliferation depend on tumor cell primary cilia.
- To elucidate the mechanism by which HDAC6 influences glioma cell proliferation and differentiation.
Main Methods:
- Utilized HDAC6 inhibitors (ACY-1215, ACY-738) on patient-derived and mouse glioma cells.
- Generated cilia-deficient glioma lines by depleting ciliogenesis genes (ARL13B, KIF3A).
- Assessed proliferation, alpha-tubulin acetylation, and cell differentiation.
Main Results:
- HDAC6 inhibitors reduced glioma cell proliferation and increased cytosolic acetylated alpha-tubulin.
- Inhibitors increased primary cilia frequency but decreased ciliary acetylated alpha-tubulin.
- Antiproliferative and differentiation effects were diminished in cilia-depleted cells.
- Overexpression of HDAC6 did not affect cilia length or frequency.
Conclusions:
- HDAC6 signaling at primary cilia promotes glioma cell proliferation by inhibiting differentiation.
- HDAC6 inhibitors' anti-glioma effects are dependent on the presence of tumor cell primary cilia.
- Further research is needed to understand HDAC6-mediated cilia disassembly regulation in glioma.
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