Related Experiment Video
Updated: Nov 7, 2025

Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Multiresistant Bacteria Isolated from Intestinal Faeces of Farm Animals in Austria
Herbert Galler1, Josefa Luxner1, Christian Petternel2
1D&R Institute of Hygiene, Microbiology and Environmental Medicine, Medical University of Graz, Neue Stiftingtalstraße 6, 8010 Graz, Austria.
Abstract:
In recent years, antibiotic-resistant bacteria with an impact on human health, such as extended spectrum β-lactamase (ESBL)-containing Enterobacteriaceae, methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococci (VRE), have become more common in food. This is due to the use of antibiotics in animal husbandry, which leads to the promotion of antibiotic resistance and thus also makes food a source of such resistant bacteria. Most studies dealing with this issue usually focus on the animals or processed food products to examine the antibiotic resistant bacteria. This study investigated the intestine as another main habitat besides the skin for multiresistant bacteria. For this purpose, faeces samples were taken directly from the intestines of swine (n = 71) and broiler (n = 100) during the slaughter process and analysed. All samples were from animals fed in Austria and slaughtered in Austrian slaughterhouses for food production. The samples were examined for the presence of ESBL-producing Enterobacteriaceae, MRSA, MRCoNS and VRE. The resistance genes of the isolated bacteria were detected and sequenced by PCR. Phenotypic ESBL-producing Escherichia coli could be isolated in 10% of broiler casings (10 out of 100) and 43.6% of swine casings (31 out of 71). In line with previous studies, the results of this study showed that CTX-M-1 was the dominant ESBL produced by E. coli from swine (n = 25, 83.3%) and SHV-12 from broilers (n = 13, 81.3%). Overall, the frequency of positive samples with multidrug-resistant bacteria was lower than in most comparable studies focusing on meat products.
Insights
This study found antibiotic-resistant bacteria in swine and broiler intestines, with higher rates in swine. ESBL-producing E. coli was prevalent, highlighting the importance of monitoring animal intestines for food safety.
Area of Science:
- Veterinary Microbiology
- Food Safety
- Antimicrobial Resistance
Background:
- Antibiotic-resistant bacteria (ARB) in food pose a significant human health risk.
- Antibiotic use in animal husbandry drives the emergence and spread of ARB.
- Food products can act as a reservoir for ARB, necessitating broader investigation.
Purpose of the Study:
- To investigate the prevalence of specific ARB, including extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae, methicillin-resistant Staphylococcus aureus (MRSA), and vancomycin-resistant Enterococci (VRE), in swine and broiler intestines.
- To identify and characterize resistance genes in isolated bacteria.
- To assess the intestine as a primary habitat for multiresistant bacteria.
Main Methods:
- Faeces samples were collected directly from the intestines of swine (n=71) and broilers (n=100) during slaughter.
- Samples were analyzed for ESBL-producing Enterobacteriaceae, MRSA, Methicillin-resistant Coagulase-Negative Staphylococci (MRCoNS), and VRE.
- Resistance genes were detected and sequenced using Polymerase Chain Reaction (PCR).
Main Results:
- Phenotypic ESBL-producing Escherichia coli were found in 10% of broiler intestines and 43.6% of swine intestines.
- CTX-M-1 was the dominant ESBL in swine E. coli (83.3%), while SHV-12 was dominant in broiler E. coli (81.3%).
- The overall frequency of multidrug-resistant bacteria in intestinal samples was lower than reported in many studies focusing on meat products.
Conclusions:
- The swine and broiler intestinal tract harbors significant levels of ESBL-producing E. coli.
- Intestinal screening provides valuable data on ARB reservoirs in food-producing animals.
- Findings suggest that while meat products may have lower contamination rates, animal intestines are a critical monitoring point for ARB surveillance.
More Related Videos
09:59Application of the Intelligent High-Throughput Antimicrobial Sensitivity Testing/Phage Screening System and Lar Index of Antimicrobial Resistance
Published on: July 21, 2023
07:20Bioprospecting of Extremophilic Microorganisms to Address Environmental Pollution
Published on: December 30, 2021
Related Concept Videos
Other Unique Bacteria
Development of Antibiotic Resistance