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The bm12 Inducible Model of Systemic Lupus Erythematosus SLE in C57BL/6 Mice
Published on: November 1, 2015
Establishing a Risk Prediction Model for Atherosclerosis in Systemic Lupus Erythematosus
Haiping Xing1, Haiyu Pang2, Tian Du1,3,4
1State Key Laboratory of Complex Severe and Rare Diseases, Department of Cardiology, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Insights
Systemic lupus erythematosus patients have increased atherosclerosis risk. A new model using Keratin 10, age, and hyperlipidemia accurately predicts this risk, aiding early detection, especially in asymptomatic cases.
Area of Science:
- Cardiovascular Research
- Rheumatology
- Genomics
Background:
- Systemic lupus erythematosus (SLE) patients exhibit a higher incidence of atherosclerosis compared to the general population.
- Existing atherosclerosis prediction models lack specificity for SLE patients, highlighting a critical gap in clinical risk assessment.
- Limited research exists on developing tailored risk prediction tools for atherosclerosis within the SLE cohort.
Purpose of the Study:
- To develop and validate a novel risk prediction model for atherosclerosis specifically in patients diagnosed with systemic lupus erythematosus.
- To identify key clinical and molecular factors that contribute to atherosclerosis development in SLE patients.
- To enhance early identification of atherosclerosis, including subclinical forms, in individuals with SLE.
Main Methods:
- RNA sequencing was performed on 67 SLE patients to analyze gene expression profiles.
- Differential gene expression analysis was conducted on 19 age-matched SLE patients with (AT) or without (Non-AT) atherosclerosis.
- Logistic regression models, including least absolute shrinkage and selection operator (LASSO) and stepwise backward selection, were employed to build the prediction model using DE genes and clinical data.
Main Results:
- A total of 106 differentially expressed genes were identified between the atherosclerosis and non-atherosclerosis groups.
- Pathway analysis indicated dysregulation in atherosclerosis signaling, oxidative phosphorylation, and IL-17 pathways in the AT group.
- The final prediction model incorporated Keratin 10, age, and hyperlipidemia, achieving an AUC of 0.922, demonstrating high predictive performance.
Conclusions:
- A robust atherosclerotic risk prediction model was successfully developed for SLE patients, integrating one gene (Keratin 10) and two clinical factors (age, hyperlipidemia).
- This model demonstrates significant potential in assisting clinicians to identify SLE patients at risk of atherosclerosis, particularly those with asymptomatic disease.
- The findings underscore the importance of molecular markers combined with clinical data for precise cardiovascular risk stratification in SLE management.
Abstract:
Background and aims: Patients with systemic lupus erythematosus (SLE) have a significantly higher incidence of atherosclerosis than the general population. Studies on atherosclerosis prediction models specific for SLE patients are very limited. This study aimed to build a risk prediction model for atherosclerosis in SLE. Methods: RNA sequencing was performed on 67 SLE patients. Subsequently, differential expression analysis was carried out on 19 pairs of age-matched SLE patients with (AT group) or without (Non-AT group) atherosclerosis using peripheral venous blood. We used logistic least absolute shrinkage and selection operator regression to select variables among differentially expressed (DE) genes and clinical features and utilized backward stepwise logistic regression to build an atherosclerosis risk prediction model with all 67 patients. The performance of the prediction model was evaluated by area under the curve (AUC), calibration curve, and decision curve analyses. Results: The 67 patients had a median age of 42.7 (Q1-Q3: 36.6-51.2) years, and 20 (29.9%) had atherosclerosis. A total of 106 DE genes were identified between the age-matched AT and Non-AT groups. Pathway analyses revealed that the AT group had upregulated atherosclerosis signaling, oxidative phosphorylation, and interleukin (IL)-17-related pathways but downregulated T cell and B cell receptor signaling. Keratin 10, age, and hyperlipidemia were selected as variables for the risk prediction model. The AUC and Hosmer-Lemeshow test p-value of the model were 0.922 and 0.666, respectively, suggesting a relatively high discrimination and calibration performance. The prediction model had a higher net benefit in the decision curve analysis than that when predicting with age or hyperlipidemia only. Conclusions: We built an atherosclerotic risk prediction model with one gene and two clinical factors. This model may greatly assist clinicians to identify SLE patients with atherosclerosis, especially asymptomatic atherosclerosis.
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