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Coding Free-Text Chief Complaints from a Health Information Exchange: A Preliminary Study
Sotiris Karagounis1, Indra Neil Sarkar1,2, Elizabeth S Chen1
1Center for Biomedical Informatics, Brown University, Providence, Rhode Island.
This study introduces a novel method for processing patient chief complaints using natural language processing (NLP) and assigning ICD-10-CM codes. The approach shows promise for enhancing electronic health record data utility in clinical care and public health.
Area of Science:
- Medical Informatics
- Computational Linguistics
- Public Health
Background:
- Chief complaints are valuable textual data within electronic health records (EHRs).
- Extracting structured information from chief complaints can enrich diagnostic and symptom data.
- Existing natural language processing (NLP) techniques may be enhanced for better utilization of this data.
Purpose of the Study:
- To present and evaluate a method for preprocessing chief complaints.
- To assign corresponding ICD-10-CM codes using NLP and medical terminologies.
- To assess the potential of this method for improving EHR data utilization.
Main Methods:
- Utilized the MetaMap NLP system and UMLS Metathesaurus for concept extraction.
- Conducted exploratory analysis on 7,942 unique chief complaints from Rhode Island's health information exchange.
- Evaluated the method on 123,086 chief complaints with associated ICD-10-CM encounter diagnoses.
Main Results:
- The proposed method achieved an 87.82% accuracy in assigning MetaMap-extracted concepts.
- Preliminary findings indicate successful preprocessing and coding of chief complaints.
- The system demonstrated effectiveness in linking chief complaints to standardized diagnostic codes.
Conclusions:
- The explored method shows potential for improving NLP techniques in healthcare.
- This approach can enhance the use of chief complaint data for clinical care, research, and public health surveillance.
- Accurate ICD-10-CM code assignment from chief complaints is feasible and beneficial.
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