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Published on: September 20, 2018
Identification of Gout Flares in Chief Complaint Text Using Natural Language Processing
John D Osborne1, James S Booth1, Tobias O'Leary1
1University of Alabama at Birmingham, Birmingham, Alabama, USA.
Insights
Identifying gout flares in the Emergency Department (ED) is crucial for patient care. A simple algorithm using chief complaints can effectively flag gout flares, improving outpatient referrals and continuity of care.
Area of Science:
- Medical Informatics
- Clinical Research
- Rheumatology
Background:
- Patients with gout flares treated in the Emergency Department (ED) often lack continuity of care post-visit.
- Effective identification and referral to outpatient gout management are needed.
- Prospective identification of gout flares in the ED is challenging due to minimal documentation.
Purpose of the Study:
- To develop and evaluate a method for prospectively identifying gout flares in ED patients.
- To assess the predictive power of chief complaint notes for gout flares.
- To create and share a valuable clinical corpus for Natural Language Processing (NLP) research.
Main Methods:
- Annotation of ED triage nurse chief complaint notes for gout flares.
- Implementation of a simple algorithm for generating gout flare ED alerts.
- Creation of a de-identified corpus of free text chief complaint notes.
Main Results:
- Chief complaint notes alone demonstrate strong predictive power for identifying gout flares.
- A functional algorithm for ED gout flare alerts was developed.
- A novel, de-identified clinical corpus of chief complaints was made publicly available.
Conclusions:
- Chief complaints in ED triage notes are highly effective for prospective gout flare identification.
- This approach can facilitate timely referrals and improve continuity of care for gout patients.
- The released corpus supports further NLP research in clinical settings.
Abstract:
Many patients with gout flares treated in the Emergency Department (ED) often do not receive optimal continuity of care after an ED visit. Thus, developing methods to identify patients with gout flares in the ED and referring them to appropriate outpatient gout care is required. While Natural Language Processing (NLP) has been used to detect gout flares retrospectively, it is much more challenging to identify patients prospectively during an ED visit where documentation is usually minimal. We annotate a corpus of ED triage nurse chief complaint notes for the presence of gout flares and implement a simple algorithm for gout flare ED alerts. We show that the chief complaint alone has strong predictive power for gout flares. We make available a de-identified version of this corpus annotated for gout mentions, which is to our knowledge the first free text chief complaint clinical corpus available.
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