Related Experiment Video
Updated: Nov 7, 2025

Self-assembling Morphologies Obtained from Helical Polycarbodiimide Copolymers and Their Triazole Derivatives
Published on: February 7, 2017
Arylethynyl Helices Supported by π-Stacking and Halogen Bonding.
Nathan P Bowling1, Erin D Speetzen1, Eric Bosch2
1Department of Chemistry, University of Wisconsin-Stevens Point, 2101 Fourth Avenue, Stevens Point, WI 54481, USA.
Self-assembling pyridyl-containing arylethynyl molecules form unique figure-eight helical structures. These crystals are stabilized by synergistic halogen bonding and pi-pi stacking interactions between the components.
Area of Science:
- Crystal Engineering
- Supramolecular Chemistry
- Organic Materials
Background:
- Arylethynyl (AE) molecules are versatile building blocks in supramolecular chemistry.
- Halogen bonding and pi-pi stacking are key non-covalent interactions driving self-assembly.
- Controlling helical structures in the solid state remains a significant challenge.
Purpose of the Study:
- To investigate the co-crystallization of a pyridyl-containing arylethynyl (AE) moiety with 1,4-diiodotetrafluorobenzene.
- To elucidate the driving forces behind the formation of unique helical motifs.
- To understand the interplay between halogen bonding and pi-pi stacking in crystal assembly.
Main Methods:
- Co-crystallization experiments.
- Single-crystal X-ray diffraction analysis.
- Computational calculations (e.g., DFT) to quantify interaction energies.
Main Results:
- Formation of figure-eight shaped helical motifs in the crystal lattice.
- Interspersion of left-handed (M) and right-handed (P) helices in a regular pattern.
- Identification of halogen bonding (N⋅⋅⋅I, 2.81–2.84 Å) and pi-pi stacking (3.57 Å) as primary assembly forces.
- Evidence of mutual enhancement between halogen bonding and pi-pi stacking interactions.
Conclusions:
- The co-crystallization strategy successfully yielded complex helical architectures.
- Synergistic halogen bonding and pi-pi stacking interactions are crucial for the observed self-assembly.
- This study provides insights into designing ordered supramolecular structures through non-covalent interactions.
Related Concept Videos
Hybridization of Atomic Orbitals II
Electrophilic Addition to Alkynes: Halogenation
Halogenation is another class of electrophilic addition reactions where a halogen molecule gets added across a π bond. In alkynes, the presence of two π bonds allows for the addition of two equivalents of halogens (bromine or chlorine). The addition of the first halogen molecule forms a trans-dihaloalkene as the major product and the cis isomer as the minor product. Subsequent addition of the second equivalent yields the tetrahalide.
Hybridization of Atomic Orbitals I
π Molecular Orbitals of the Allyl Cation and Anion
Structure and Physical Properties of Alkynes
In nature, compounds containing both carbon and hydrogen are known as "hydrocarbons". Aliphatic hydrocarbons are compounds whose molecules contain saturated single bonds (i.e., alkanes) or unsaturated double or triple bonds. Alkenes contain carbon–carbon double bonds and have a structural formula CnH2n. Unsaturated hydrocarbons containing carbon–carbon triple bonds are called "alkynes" and are structurally represented by the formula CnH2n-2.
The...
Aromatic Hydrocarbon Cations: Structural Overview
Removing one hydrogen from the intervening CH2 group...

