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Updated: Nov 6, 2025

Isolation and Chemical Characterization of Lipid A from Gram-negative Bacteria
Published on: September 16, 2013
DpaA Detaches Braun's Lipoprotein from Peptidoglycan
Matthias Winkle1, Víctor M Hernández-Rocamora1, Karthik Pullela2
1Centre for Bacterial Cell Biology, Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom.
Researchers discovered peptidoglycan meso-diaminopimelic acid protein amidase A (DpaA), an enzyme that detaches Braun
Area of Science:
- Bacterial cell envelope biogenesis
- Gram-negative bacterial outer membrane structure
- Protein-peptidoglycan interactions
Background:
- Gram-negative bacteria possess a unique cell envelope with an outer membrane linked to peptidoglycan.
- This linkage, stabilized by abundant outer membrane proteins like Braun's lipoprotein (Lpp), is crucial for barrier function.
- The Lpp-peptidoglycan attachment was previously considered irreversible.
Purpose of the Study:
- To investigate the function of the uncharacterized E. coli LdtF protein.
- To identify the enzyme responsible for detaching Lpp from peptidoglycan.
- To understand the role of Lpp-peptidoglycan linkage dynamics in bacterial physiology.
Main Methods:
- Biochemical assays to characterize LdtF activity.
- Genetic manipulation of E. coli strains (gene deletion, transposon mutagenesis).
- Analysis of lipopolysaccharide biosynthesis and cell envelope integrity.
Main Results:
- LdtF was identified as an amidase that hydrolyzes the Lpp-peptidoglycan linkage, and renamed DpaA.
- Detachment of Lpp by DpaA is beneficial under specific stress conditions.
- dpaA deletion mutants showed increased susceptibility to transposon inactivation in lapB, affecting lipopolysaccharide biosynthesis.
Conclusions:
- The Lpp-peptidoglycan linkage in E. coli is dynamic, regulated by the amidase DpaA.
- DpaA-mediated Lpp detachment plays a role in cellular adaptation to stress.
- DpaA-like enzymes are conserved in Gram-negative bacteria, suggesting broader roles in cell envelope regulation.
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