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Imitation learning for improved 3D PET/MR attenuation correction.

Kerstin Kläser1, Thomas Varsavsky1, Pawel Markiewicz1

  • 1Department of Medical Physics & Biomedical Engineering, University College London, London WC1E 6BT, UK; School of Biomedical Engineering & Imaging Sciences, King's College London, London SE1 7EH, UK.

Medical Image Analysis
|May 5, 2021
PubMed
Summary
This summary is machine-generated.

This study introduces a new deep learning method for creating pseudo CT (pCT) images for PET/MRI scans. The approach improves pCT accuracy and significantly reduces errors in PET reconstruction, outperforming existing methods.

Keywords:
Convolutional neural networkDeep learningImitation learningMR to CT synthesis

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Radiology

Background:

  • Pseudo CT (pCT) image quality is typically assessed by intensity similarity to CT.
  • This metric overlooks the primary goal in PET/MRI: accurate PET reconstruction using pCT as an attenuation map.
  • Minimizing pCT-CT error does not guarantee optimal PET reconstruction.

Purpose of the Study:

  • To develop a novel deep learning framework for synthesizing pCT images tailored for PET reconstruction in PET/MRI.
  • To address the limitations of traditional intensity-wise similarity metrics for pCT assessment.
  • To improve the accuracy of pseudo PET (pPET) reconstructions derived from pCT attenuation maps.

Main Methods:

  • A multi-hypothesis deep learning framework using a convolutional neural network (CNN) was developed.
  • The CNN synthesizes pCTs by minimizing a combined loss: pixel-wise error (pCT-CT) and a novel metric-loss.
  • The metric-loss, defined by another CNN, specifically targets the reduction of consequent PET reconstruction errors.
  • Training utilized a database of 20 3D MR/CT/PET brain image pairs.

Main Results:

  • The proposed method significantly improved pCT accuracy, achieving a Mean Absolute Error of 110.98 HU ± 19.22 HU.
  • This outperformed a baseline CNN (172.12 HU ± 19.61 HU) and a multi-atlas propagation approach (153.40 HU ± 18.68 HU).
  • Consequently, PET reconstruction error was substantially reduced to 4.74% ± 1.52%, compared to 13.72% ± 2.48% (baseline) and 6.68% ± 2.06% (multi-atlas).

Conclusions:

  • The novel deep learning framework effectively synthesizes accurate pCT images for PET/MRI.
  • The method directly optimizes for improved PET reconstruction, surpassing conventional approaches.
  • This represents a significant advancement in generating reliable attenuation maps for PET imaging in hybrid scanners.