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Analysis of Combinatorial miRNA Treatments to Regulate Cell Cycle and Angiogenesis
Published on: March 30, 2019
The comprehensive landscape of miR-34a in cancer research
Sijing Li1, Xiaohui Wei2, Jinyong He1,3,4
1New Drug Screening Center, China Pharmaceutical University, Nanjing, 210009, China.
Abstract:
MicroRNA-34 (miR-34) plays central roles in human diseases, especially cancers. Inactivation of miR-34 is detected in cancer cell lines and tumor tissues versus normal controls, implying its potential tumor-suppressive effect. Clinically, miR-34 has been identified as promising prognostic indicators for various cancers. In fact, members of the miR-34 family, especially miR-34a, have been convincingly proved to affect almost the whole cancer progression process. Here, a total of 512 (miR-34a, 10/21), 85 (miR-34b, 10/16), and 114 (miR-34c, 10/14) putative targets of miR-34a/b/c are predicted by at least ten miRNA databases, respectively. These targets are further analyzed in gene ontology (GO), KEGG pathway, and the Reactome pathway dataset. The results suggest their involvement in the regulation of signal transduction, macromolecule metabolism, and protein modification. Also, the targets are implicated in critical signaling pathways, such as MAPK, Notch, Wnt, PI3K/AKT, p53, and Ras, as well as apoptosis, cell cycle, and EMT-related pathways. Moreover, the upstream regulators of miR-34a, mainly including transcription factors (TFs), lncRNAs, and DNA methylation, will be summarized. Meanwhile, the potential TF upstream of miR-34a/b/c will be predicted by PROMO, JASPAR, Animal TFDB 3.0, and GeneCard databases. Notably, miR-34a is an attractive target for certain cancers. In fact, miR-34a-based systemic delivery combined with chemotherapy or radiotherapy can more effectively control tumor progression. Collectively, this review will provide a panorama for miR-34a in cancer research.
Insights
MicroRNA-34 (miR-34), particularly miR-34a, shows tumor-suppressive effects in cancers. Its inactivation is linked to cancer, and it influences cancer progression, making it a key target for therapies.
Area of Science:
- Molecular Biology
- Oncology
- Genetics
Background:
- MicroRNA-34 (miR-34) family members, especially miR-34a, are crucial in human diseases, particularly cancers.
- Inactivation of miR-34 is observed in cancer cells and tumors, suggesting a tumor-suppressive role.
- miR-34 has potential as a prognostic indicator in various cancer types.
Purpose of the Study:
- To comprehensively review the role of miR-34a in cancer progression.
- To identify and analyze the predicted targets and upstream regulators of miR-34 family members.
- To explore the therapeutic potential of miR-34a in cancer treatment.
Main Methods:
- Prediction of miR-34a/b/c targets using multiple miRNA databases.
- Analysis of predicted targets through Gene Ontology (GO), KEGG, and Reactome pathway datasets.
- Identification of upstream regulators, including transcription factors (TFs), lncRNAs, and DNA methylation for miR-34a.
Main Results:
- A significant number of putative targets for miR-34a/b/c were identified and analyzed.
- Targets are involved in crucial cellular processes like signal transduction, metabolism, and pathways such as MAPK, Wnt, and apoptosis.
- Upstream regulators of miR-34a, including TFs, were predicted using bioinformatics tools.
Conclusions:
- miR-34a plays a significant role in regulating cancer progression through various signaling pathways.
- miR-34a is a promising therapeutic target, with miR-34a-based delivery showing potential in combination therapies.
- This review provides a broad overview of miR-34a's involvement in cancer research and therapy.
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