Cutibacterium modestum and "Propionibacterium humerusii" represent the same species that is commonly misidentified as

Daniel Goldenberger1, Kirstine K Søgaard2,3, Aline Cuénod3

  • 1Division of Clinical Bacteriology and Mycology, University Hospital Basel, University of Basel, Petersgraben 4, 4031, Basel, Switzerland. daniel.goldenberger@usb.ch.

Insights

A novel Cutibacterium species, identified as Cutibacterium modestum, was isolated from an implant infection. This species is often misidentified as Cutibacterium acnes, highlighting challenges in bacterial identification.

Area of Science:

  • Microbiology
  • Infectious Diseases
  • Bacterial Taxonomy

Background:

  • Cutibacterium species are increasingly implicated in soft tissue and implant-associated infections.
  • Accurate identification of Cutibacterium species is crucial for effective treatment and understanding infection dynamics.
  • Challenges exist in differentiating closely related Cutibacterium species due to inconsistent reference data.

Purpose of the Study:

  • To isolate and identify a novel Cutibacterium species from an implant-associated infection.
  • To characterize the isolate using a combination of conventional and molecular methods.
  • To clarify the taxonomic status of the novel species and its relationship to existing species, including "Propionibacterium humerusii".

Main Methods:

  • Conventional identification: Gram stain, MALDI-TOF MS, antimicrobial susceptibility testing.
  • Molecular identification: Partial 16S rRNA gene sequencing and whole genome sequencing.
  • Comparative analysis of isolate sequences with publicly available reference data.

Main Results:

  • The isolate was identified as Cutibacterium modestum, a recently described species.
  • 16S rRNA gene sequencing was initially hampered by inaccuracies in the reference sequence for C. modestum M12T.
  • The study confirmed that the novel species is identical to the tentatively named "Propionibacterium humerusii".

Conclusions:

  • Cutibacterium modestum is a clinically significant species often misidentified as C. acnes.
  • Accurate identification methods and reliable reference sequences are essential for resolving taxonomic uncertainties.
  • C. modestum represents an important addition to the genus Cutibacterium and the human skin microbiome.

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