Acute necrotizing encephalopathy-linked mutations in Nup358 impair interaction of Nup358 with TNRC6/GW182 and miRNA

Prachi Deshmukh1, Aditi Singh1, Deepak Khuperkar1

  • 1National Centre for Cell Science, S.P. Pune University Campus, Pune, 411007, India.

Insights

Nup358 protein mutations linked to ANE1 neurological disorder impair its interaction with GW182, disrupting microRNA (miRNA) pathways crucial for cellular regulation.

Area of Science:

  • Molecular Biology
  • Neuroscience
  • Genetics

Background:

  • MicroRNA (miRNA)-mediated translational suppression regulates cellular processes.
  • Nup358 protein is implicated in acute necrotizing encephalopathy 1 (ANE1).
  • Nup358 facilitates the interaction between the miRNA-induced silencing complex (miRISC) and target mRNAs.

Purpose of the Study:

  • To characterize the interaction between Nup358 and GW182.
  • To investigate the impact of ANE1-associated Nup358 mutations on this interaction.
  • To understand how Nup358 dysfunction contributes to ANE1 pathogenesis.

Main Methods:

  • Protein interaction studies to map Nup358 and GW182 binding sites.
  • Analysis of Nup358 mutants associated with ANE1.
  • Functional assays assessing Nup358's role in the miRNA pathway.

Main Results:

  • The N-terminal region of Nup358 directly interacts with the C-terminal silencing domain of GW182.
  • ANE1-associated Nup358 mutants exhibit reduced binding affinity to GW182.
  • The T585M mutation in Nup358 significantly impairs its function in the miRNA pathway.

Conclusions:

  • Nup358 directly interacts with GW182, a key component of the miRISC.
  • Mutations in Nup358 found in ANE1 patients weaken this interaction.
  • Dysregulation of the miRNA pathway due to Nup358 mutations may contribute to ANE1 development.

Related Concept Videos

Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
11.2K
Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

3.0K
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
8.1K
Nuclear Export01:42

Nuclear Export

The nucleus restricts several proteins within and allows others to pass. The restricted proteins possess a nuclear retention sequence or NRS, anchoring them to the nuclear lamins and preventing their transport to the cytosol. The non-restricted proteins, after their synthesis, are transported to their site of action, such as the cytosol or other organelles, with the help of nuclear export signals or NES.
NES are of three types- the canonical 10-residue long leucine-rich signal and other...
4.3K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
3.3K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
22.8K