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NeoFox: annotating neoantigen candidates with neoantigen features
Franziska Lang1, Pablo Riesgo-Ferreiro1, Martin Löwer1
1Biomarker Development Center, TRON-Translational Oncology at the University Medical Center of the Johannes Gutenberg University Mainz, 55131 Mainz, Germany.
Summary:
The detection and prediction of true neoantigens is of great importance for the field of cancer immunotherapy. Wesearched the literature for proposed neoantigen features and integrated them into a toolbox called NEOantigen Feature toolbOX (NeoFox). NeoFox is an easy-to-use Python package that enables the annotation of neoantigen candidates with 16 neoantigen features.
Availability And Implementation:
NeoFox is freely available as an open source Python package released under the GNU General Public License (GPL) v3 license at https://github.com/TRON-Bioinformatics/neofox.
Supplementary Information:
Supplementary data are available at Bioinformatics online.
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