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Adaptive laboratory evolution accelerated glutarate production by Corynebacterium glutamicum.

Carina Prell1, Tobias Busche2, Christian Rückert2

  • 1Genetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, Universitätsstr. 25, 33615, Bielefeld, Germany.

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|May 11, 2021
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Summary

Adaptive laboratory evolution enhanced microbial production of glutarate by coupling growth to biosynthesis. This resulted in faster growth and twofold higher glutarate productivity, demonstrating a rational metabolic engineering strategy.

Keywords:
Adaptive laboratory evolutionCorynebacterium glutamicumGlutarateMetabolic engineeringReactive extractionReverse geneticsVolumetric productivity

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Area of Science:

  • Biotechnology
  • Metabolic Engineering
  • Synthetic Biology

Background:

  • Growing global demand for biobased polymers necessitates improved microbial production of precursors like glutarate.
  • Current production hosts require optimization for higher titers, yields, and reduced bioprocess duration.

Purpose of the Study:

  • To enhance glutarate production in *C. glutamicum* using adaptive laboratory evolution.
  • To investigate the link between faster growth and improved glutarate production via flux enforcement.

Main Methods:

  • Engineered *C. glutamicum* with flux enforcement by deleting the *gdh* gene to couple growth to glutarate production.
  • Applied adaptive laboratory evolution through serial dilution to select for faster-growing mutants.
  • Utilized genome sequencing and reverse genetics to identify causal mutations.
  • Performed bioreactor-scale fermentation (batch and fed-batch) and optimized downstream reactive extraction.

Main Results:

  • Achieved a twofold increase in volumetric productivity (0.18 g L-1 h-1) in evolved mutants compared to the parental strain.
  • Identified an amino acid exchange in L-glutamic acid-2-oxoglutarate aminotransferase as causal for accelerated glutarate production.
  • Demonstrated stable performance at 2 L scale, reaching a titer of 22.7 g L-1, yield of 0.23 g g-1, and productivity of 0.35 g L-1 h-1.
  • Optimized reactive extraction for glutarate recovery with high yields (58% and 99%).

Conclusions:

  • Flux enforcement enables selection of faster-growing and producing strains via adaptive laboratory evolution.
  • Genome sequencing and reverse genetics are effective for identifying causal mutations in metabolic engineering.
  • This approach provides a rational strategy for improving microbial production of chemicals like glutarate.