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Updated: Nov 6, 2025

A Protocol for Real-time 3D Single Particle Tracking
Published on: January 3, 2018
Path planning in three dimensional live environment with randomly moving obstacles for viscoelastic bio-particle
Moharam Habibnejad Korayem1, Zahra Rastegar1
1Robotic Research Laboratory, Center of Excellence in Experimental Solid Mechanics and Dynamics, School of Mechanical Engineering, Iran University of Science and Technology, Tehran, Iran.
This study optimizes atomic force microscopy (AFM) path planning in complex environments. The research minimizes tool error and applied force for accurate biological applications, considering various constraints.
Area of Science:
- Biophysics
- Nanotechnology
- Robotics
Background:
- Atomic Force Microscopy (AFM) offers versatile capabilities for various environments and scales.
- Accurate tool performance is critical for success in biological applications.
Purpose of the Study:
- To provide an optimized path for AFM operation in a live environment with random fixed and moving obstacles.
- To minimize a cost function combining tool error, maximum applied force, and particle deformation.
Main Methods:
- Path planning for a viscoelastic particle considering constraints like critical force, time, and maximum applied force.
- Incorporation of fixed and moving obstacles with random profiles and distributions.
- Comparison of routing results with previous works to validate path correctness.
Main Results:
- The optimized path was successfully determined for a viscoelastic particle in a simulated live environment.
- Path planning time varied based on constraints: 117.657s (critical force/time), 118.240s (max applied force), and 120.540s (all constraints).
- The applied force constraint was found to be more influential than others, increasing path planning time.
Conclusions:
- The developed path optimization method is effective for AFM operations in complex, obstacle-filled environments.
- Constraint analysis reveals the significant impact of applied force on path planning efficiency.
- The study validates the accuracy and reliability of AFM path planning in simulated biological settings.
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