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Updated: Nov 5, 2025

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Flavobacterium inviolabile sp. nov. isolated from stream water
Ve Van Le1,2, Haeseong Lee1, Shalem Raj Padakandla1,3
1Division of Biotechnology, Jeonbuk National University, Iksan, 54596, Republic of Korea.
A new bacterium, Flavobacterium inviolabile sp. nov., was identified from Korean stream water. This discovery expands the known diversity of Flavobacterium species, offering insights into microbial ecosystems.
Area of Science:
- Microbiology
- Bacteriology
- Environmental Science
Background:
- Microbial diversity in freshwater ecosystems is crucial for ecological balance.
- The genus Flavobacterium comprises diverse species with varying environmental roles.
- Isolation and characterization of novel bacteria contribute to understanding microbial genomics and ecology.
Purpose of the Study:
- To isolate and characterize a novel bacterial strain from Moonsan stream water.
- To determine the taxonomic and phylogenetic placement of the novel isolate.
- To propose a new species within the genus Flavobacterium based on polyphasic evidence.
Main Methods:
- Isolation and cultivation of strain P2-65T from stream water.
- Physiological and biochemical characterization, including growth conditions and fatty acid analysis.
- 16S rRNA gene sequencing, average nucleotide identity (ANI), and digital DNA-DNA hybridization (dDDH) for phylogenetic analysis.
Main Results:
- Strain P2-65T is a Gram-stain-negative, aerobic, rod-shaped bacterium.
- Phylogenetic analysis based on 16S rRNA gene sequences showed close relatedness to Flavobacterium cauense and Flavobacterium cheniae.
- ANI and dDDH values were below thresholds for species delineation, supporting novelty. Major fatty acids and polar lipids were identified, and the G+C content was 39.7%.
Conclusions:
- Strain P2-65T represents a novel species of the genus Flavobacterium.
- The proposed name for this new species is Flavobacterium inviolabile sp. nov.
- The type strain is P2-65T (KCTC 62055T = NBRC 112953T).
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