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Updated: Nov 5, 2025

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Application of MALDI-TOF MS Profiling Coupled With Functionalized Magnetic Enrichment for Rapid Identification of
Jichong Ying1, Wenjing Gao2, Dichao Huang1
1Ningbo No. 6 Hospital, Ningbo, China.
Abstract:
Posttraumatic infections can occur in orthopedic trauma patients, especially in open fractures. Rapid and accurate identification of pathogens in orthopedic trauma is important for clinical diagnosis and antimicrobial treatment. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been successfully used for first-line identification of pathogens grown on culture plates. However, for direct analysis of liquid clinical specimens, pre-purification of the sample is necessary. Herein, we investigated the feasibility of coupling Fc-MBL@Fe3O4 enrichment with MALDI-TOF MS profiling in the identification of pathogens in liquid-cultured samples. This method is successfully used for the identification of pathogens in a patient with an open-leg fracture obtained at sea. Pathogens were enriched by Fc-MBL@Fe3O4 from briefly pre-cultured liquid media and identified by MALDI-TOF MS. We identified an opportunistic pathogen, Vibrio alginolyticus, which is uncommon in clinical orthopedic trauma infection but exists widely in the sea. Therefore, combining Fc-MBL@Fe3O4 enrichment and MALDI-TOF MS profiling has great potential for direct identification of microbes in clinical samples.
Insights
Rapidly identifying pathogens in orthopedic trauma is crucial. A new method using Fc-MBL@Fe3O4 enrichment and MALDI-TOF MS successfully identified Vibrio alginolyticus in a patient with an open leg fracture, showing potential for direct clinical sample analysis.
Area of Science:
- Microbiology
- Biotechnology
- Clinical Diagnostics
Background:
- Posttraumatic infections pose significant risks in orthopedic trauma, particularly with open fractures.
- Accurate and rapid pathogen identification is essential for effective clinical diagnosis and antimicrobial therapy.
- Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a standard for identifying cultured pathogens, but direct analysis of liquid samples requires pre-purification.
Purpose of the Study:
- To investigate the feasibility of combining Fc-MBL@Fe3O4 enrichment with MALDI-TOF MS for pathogen identification in liquid-cultured clinical samples.
- To evaluate this novel approach for direct microbial profiling in orthopedic trauma infections.
Main Methods:
- Utilized Fc-MBL@Fe3O4 nanoparticles for the enrichment of pathogens from briefly pre-cultured liquid media.
- Employed MALDI-TOF MS for the identification of enriched microbial targets.
- Applied the combined method to a clinical sample from a patient with an open-leg fracture.
Main Results:
- Successfully identified pathogens in a liquid-cultured sample from a patient with an open-leg fracture.
- The method enabled the identification of the opportunistic pathogen *Vibrio alginolyticus*, an uncommon cause of orthopedic trauma infection.
- Demonstrated the efficacy of Fc-MBL@Fe3O4 enrichment coupled with MALDI-TOF MS for microbial detection.
Conclusions:
- The combination of Fc-MBL@Fe3O4 enrichment and MALDI-TOF MS profiling shows significant potential for the direct identification of microbes in clinical samples.
- This approach offers a promising advancement for diagnosing infections in orthopedic trauma patients, especially those involving challenging liquid specimens.
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