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Antibiotic tolerance, persistence, and resistance of the evolved minimal cell, Mycoplasma mycoides JCVI-Syn3B
Tahmina Hossain1, Heather S Deter2, Eliza J Peters1
1Department of Biology and Microbiology, South Dakota State University, Brookings, SD 57006, USA.
Abstract:
Antibiotic resistance is a growing problem, but bacteria can evade antibiotic treatment via tolerance and persistence. Antibiotic persisters are a small subpopulation of bacteria that tolerate antibiotics due to a physiologically dormant state. Hence, persistence is considered a major contributor to the evolution of antibiotic-resistant and relapsing infections. Here, we used the synthetically developed minimal cell Mycoplasma mycoides JCVI-Syn3B to examine essential mechanisms of antibiotic survival. The minimal cell contains only 473 genes, and most genes are essential. Its reduced complexity helps to reveal hidden phenomenon and fundamental biological principles can be explored because of less redundancy and feedback between systems compared to natural cells. We found that Syn3B evolves antibiotic resistance to different types of antibiotics expeditiously. The minimal cell also tolerates and persists against multiple antibiotics. It contains a few already identified persister-related genes, although lacking many systems previously linked to persistence (e.g. toxin-antitoxin systems, ribosome hibernation genes).
Insights
The minimal cell JCVI-Syn3B rapidly evolves antibiotic resistance and exhibits tolerance and persistence against multiple antibiotics. This simplified model aids in understanding bacterial survival mechanisms beyond known persistence factors.
Area of Science:
- Microbiology and Molecular Biology
- Synthetic Biology
- Antibiotic Resistance Research
Background:
- Antibiotic resistance is a significant global health threat, exacerbated by bacterial tolerance and persistence.
- Antibiotic persisters, a dormant subpopulation, contribute to relapsing infections and the evolution of resistance.
- Understanding bacterial survival mechanisms is crucial for developing new therapeutic strategies.
Purpose of the Study:
- To investigate essential mechanisms of antibiotic survival using a synthetically developed minimal cell, JCVI-Syn3B.
- To leverage the reduced complexity of the minimal cell to uncover fundamental biological principles of antibiotic evasion.
Main Methods:
- Utilized the minimal cell JCVI-Syn3B, comprising 473 essential genes, for antibiotic survival studies.
- Examined the minimal cell's capacity to evolve antibiotic resistance and its tolerance/persistence against various antibiotics.
- Analyzed the presence of known persister-related genes within the minimal cell's genetic makeup.
Main Results:
- JCVI-Syn3B expeditiously evolved antibiotic resistance to different classes of antibiotics.
- The minimal cell demonstrated tolerance and persistence against multiple antibiotics.
- While containing some known persister genes, Syn3B lacked several systems previously associated with persistence, such as toxin-antitoxin systems.
Conclusions:
- The minimal cell JCVI-Syn3B serves as a powerful model for studying antibiotic survival mechanisms due to its simplified genetic architecture.
- Bacterial persistence and tolerance can occur through mechanisms not solely reliant on previously identified pathways.
- Further research with minimal cells can reveal novel insights into antibiotic evasion and inform the development of strategies to combat antibiotic resistance.
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