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Updated: Nov 5, 2025

Cell Subtype-specific Analysis of Neuronal Membrane Proteasome in Somatosensory Neurons
Published on: October 10, 2025
Tubulin binding potentially clears up Bortezomib and Carfilzomib differential neurotoxic effect
A Malacrida1,2, S Semperboni3,4, A Di Domizio5,6
1School of Medicine and Surgery, Experimental Neurology Unit, University of Milano - Bicocca, Via Cadore 48, 20900, Monza, MB, Italy. alessio.malacrida@unimib.it.
Abstract:
Proteasome inhibitors (PIs) represent the gold standard in the treatment of multiple myeloma. Among PIs, Bortezomib (BTZ) is frequently used as first line therapy, but peripheral neuropathy (PN), occurring approximately in 50% of patients, impairs their life, representing a dose-limiting toxicity. Carfilzomib (CFZ), a second-generation PI, induces a significantly less severe PN. We investigated possible BTZ and CFZ off-targets able to explain their different neurotoxicity profiles. In order to identify the possible PIs off-targets we used the SPILLO-PBSS software that performs a structure-based in silico screening on a proteome-wide scale. Among the top-ranked off-targets of BTZ identified by SPILLO-PBSS we focused on tubulin which, by contrast, did not turn out to be an off-target of CFZ. We tested the hypothesis that the direct interaction between BTZ and microtubules would inhibit the tubulin alfa GTPase activity, thus reducing the microtubule catastrophe and consequently furthering the microtubules polymerization. This hypothesis was validated in a cell-free model, since BTZ (but not CFZ) reduces the concentration of the free phosphate released during GTP hydrolysis. Moreover, NMR binding studies clearly demonstrated that BTZ, unlike CFZ, is able to interact with both tubulin dimers and polymerized form. Our data suggest that different BTZ and CFZ neurotoxicity profiles are independent from their proteasome inhibition, as demonstrated in adult mice dorsal root ganglia primary sensory neurons, and, first, we demonstrate, in a cell free model, that BTZ is able to directly bind and perturb microtubules.
Insights
Bortezomib (BTZ) directly binds and perturbs microtubules, inhibiting tubulin activity. This mechanism, unlike proteasome inhibition, explains BTZ
Area of Science:
- Pharmacology
- Neuroscience
- Biochemistry
Background:
- Proteasome inhibitors (PIs) like Bortezomib (BTZ) are standard multiple myeloma treatments.
- BTZ causes dose-limiting peripheral neuropathy (PN) in ~50% of patients.
- Second-generation PI Carfilzomib (CFZ) shows less severe PN.
Purpose of the Study:
- Investigate off-target mechanisms of BTZ and CFZ to explain differential neurotoxicity.
- Hypothesize and test direct interaction of BTZ with microtubules.
Main Methods:
- In silico screening using SPILLO-PBSS software to identify PI off-targets.
- Cell-free assays to measure GTPase activity and phosphate release.
- Nuclear Magnetic Resonance (NMR) studies for binding interactions.
- Primary sensory neuron studies in adult mice.
Main Results:
- SPILLO-PBSS identified tubulin as a BTZ off-target, but not for CFZ.
- BTZ, but not CFZ, directly inhibits tubulin GTPase activity in cell-free models.
- NMR confirmed BTZ binds to tubulin dimers and polymers, unlike CFZ.
- Neurotoxicity differences are independent of proteasome inhibition.
Conclusions:
- BTZ's direct interaction with and perturbation of microtubules contributes to its neurotoxicity.
- This microtubule-binding mechanism is distinct from proteasome inhibition.
- Findings provide a novel explanation for differential neurotoxicity between BTZ and CFZ.
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