Related Experiment Video
Updated: Nov 5, 2025

Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models
Published on: December 9, 2016
2b or Not 2b: How Opposing FGF Receptor Splice Variants Are Blocking Progress in Precision Oncology.
Richard J Epstein1,2, Li Jun Tian1, Yan Fei Gu1
1New Hope Cancer Center, Beijing United Hospital, 9-11 Jiangtai West Rd, Chaoyang, Beijing 100015, China.
Fibroblast growth factor receptor 2 (FGFR2) splicing dictates its role in cancer, switching between tumor suppression and progression. Targeting specific FGFR2 isoforms is crucial for effective cancer therapy.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Fibroblast growth factors (FGFs) and their receptors (FGFRs) are implicated in numerous cancers, yet targeted therapies have limited clinical success.
- RNA splicing of FGFRs significantly impacts their function and interactions, complicating drug development strategies.
- FGFR2, in particular, exhibits splice-dependent functions critical to cancer cell behavior.
Purpose of the Study:
- To investigate the splice-dependent roles of FGFR2 isoforms in cancer.
- To highlight the limitations of non-specific FGFR inhibitors.
- To underscore the need for isoform-specific targeting and predictive diagnostics in FGFR-driven cancers.
Main Methods:
- Analysis of peer-reviewed studies on FGFs/FGFRs in cancer.
- Review of RNA splicing mechanisms affecting FGFR2 affinity and function.
- Examination of FGFR2b and FGFR2c isoform activities in relation to tumor suppressor genes (CDH1, PTEN).
Main Results:
- FGFR2b expression promotes apoptotic sensitivity, while FGFR2c drives tumor progression via epithelial-mesenchymal transition.
- FGFR1 and FGFR3 primarily exhibit proliferative actions.
- Splice switching or tumor suppressor gene silencing can convert FGFR2b's tumor-suppressive function to a proliferative one.
- Non-selective pan-FGFR inhibitors may block opposing FGFR2 isoforms, hindering therapeutic efficacy.
Conclusions:
- FGFR2's dual role, dictated by splicing, presents a significant challenge for FGFR-targeted cancer therapy.
- Development of isoform-specific drugs, such as antibodies targeting ligand-FGFR2c binding, is warranted.
- Advanced molecular pathology is needed to predict FGFR2 isoform activity in diverse tumor microenvironments.
Related Concept Videos
Targeted Cancer Therapies
There are several types of targeted therapies against...
RNA Splicing
Transducer Mechanism: G Protein–Coupled Receptors
GPCRs are also called heptahelical,...
Cancer-Critical Genes II: Tumor Suppressor Genes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...
Tumor Progression
Colon cancer is one of the best-documented examples of tumor progression. Early mutation in the APC gene in colon cells causes a small growth on the colon wall called a polyp. With time, this polyp grows into a benign, pre-cancerous tumor. Further...
Alternative RNA Splicing
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...

