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Implications of Enhancer Transcription and eRNAs in Cancer
Santanu Adhikary1,2, Siddhartha Roy2, Jessica Chacon3
1Biophysics and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata, India.
Abstract:
Despite extensive progress in developing anticancer therapies, therapy resistance remains a major challenge that promotes disease relapse. The changes that lead to therapy resistance can be intrinsically present or may be initiated during treatment. Genetic and epigenetic heterogeneity in tumors make it more challenging to deal with therapy resistance. Recent advances in genome-wide analyses have revealed that the deregulation of distal gene regulatory elements, such as enhancers, appears in several pathophysiological conditions, including cancer. Beyond the conventional function of enhancers in recruiting transcription factors to gene promoters, enhancer elements are also transcribed into noncoding RNAs known as enhancer RNAs (eRNA). Accumulating evidence suggests that uncontrolled enhancer activity with aberrant eRNA expression promotes oncogenesis. Interestingly, tissue-specific, transcribed eRNAs from active enhancers can serve as potential therapeutic targets or biomarkers in several cancer types. This review provides a comprehensive overview of the mechanisms of enhancer transcription and eRNAs as well as their potential roles in cancer and drug resistance.
Insights
Enhancer RNAs (eRNAs) are transcribed from gene regulatory elements and play a role in cancer development and drug resistance. Targeting eRNAs offers potential for new cancer therapies and biomarkers.
Area of Science:
- Molecular Biology
- Genetics
- Oncology
Background:
- Therapy resistance is a major challenge in cancer treatment, leading to disease relapse.
- Tumor genetic and epigenetic heterogeneity complicates treatment strategies.
- Deregulation of gene regulatory elements like enhancers is implicated in cancer.
Purpose of the Study:
- To provide a comprehensive overview of enhancer transcription and enhancer RNAs (eRNAs).
- To explore the roles of eRNAs in cancer development and drug resistance.
- To discuss the potential of eRNAs as therapeutic targets and biomarkers.
Main Methods:
- Review of current literature on enhancer function, transcription, and eRNAs.
- Analysis of genome-wide data identifying enhancer deregulation in cancer.
- Synthesis of evidence linking eRNA expression to oncogenesis and therapy resistance.
Main Results:
- Enhancers are transcribed into noncoding RNAs called eRNAs.
- Aberrant eRNA expression is associated with uncontrolled enhancer activity and oncogenesis.
- Tissue-specific eRNAs from active enhancers show potential as cancer biomarkers and therapeutic targets.
Conclusions:
- Enhancer RNAs are critical regulators in cancer.
- Understanding eRNA mechanisms can lead to novel strategies for overcoming cancer drug resistance.
- eRNAs represent promising targets for future cancer therapies.
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